RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 ZKSCAN8Q15776 578 aaPredicted RBP23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 RBM20Q5T481 1227 aaKnown RBP23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 KYAT3Q6YP21 454 aaKnown RBP23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 SRRM1Q8IYB3 904 aaKnown RBP23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 PELI3Q8N2H9 469 aa23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 TLCD1Q96CP7 247 aa23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 NDNQ99608 321 aa23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 SNX15Q9NRS6 342 aa23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 TLK1Q9UKI8 766 aa23.29■■□□□ 1.32
TSPAN4-202ENST00000397396 PLXNB3Q9ULL4 1909 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 A6NNZ2 444 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 TPP1O14773 563 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 CDK14O94921 469 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 ALDOAP04075 364 aaKnown RBP23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 F7P08709 466 aaPredicted RBP23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 FDXRP22570 491 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 CD27P26842 260 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 HTR1BP28222 390 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 CA5AP35218 305 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 MAGEA12P43365 314 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 FNTBP49356 437 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 B4GALNT1Q00973 533 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 ZNF528Q3MIS6 628 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 CTSL3PQ5NE16 218 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 ZNF549Q6P9A3 640 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 RAPH1Q70E73 1250 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 LCA5Q86VQ0 697 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 SLC41A1Q8IVJ1 513 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 TMEM145Q8NBT3 493 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 SNX19Q92543 992 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 ARL8AQ96BM9 186 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 APOOQ9BUR5 198 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 RMI1Q9H9A7 625 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 SSU72Q9NP77 194 aaKnown RBP23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 FZD3Q9NPG1 666 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 KLHL42Q9P2K6 505 aa23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 MBD1Q9UIS9 605 aaPredicted RBP23.28■■□□□ 1.32
TSPAN4-202ENST00000397396 KLHL33A6NCF5 533 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 KPNA5O15131 536 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 MAGEC1O60732 1142 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 ASMTLO95671 621 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 CHRM3P20309 590 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 SAT1P21673 171 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 CNR2P34972 360 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 RABIFP47224 123 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 NUBP1P53384 320 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 PDAP1Q13442 181 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 BCL7AQ4VC05 210 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 TTMPQ5BVD1 217 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 TSSK4Q6SA08 328 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 MTERF4Q7Z6M4 381 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 PNPLA1Q8N8W4 532 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 SERAC1Q96JX3 654 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 TSNARE1Q96NA8 513 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 DUSP15Q9H1R2 295 aaPredicted RBP23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 SYTL2Q9HCH5 934 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 TRMT6Q9UJA5 497 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 GPR34Q9UPC5 381 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 ANKRD6Q9Y2G4 727 aa23.27■■□□□ 1.32
TSPAN4-202ENST00000397396 A0A087X1B8 175 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 MTX2O75431 263 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 RFPL1O75677 317 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 KRT4P19013 534 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 AVPR2P30518 371 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 SLC26A3P40879 764 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 CCNFP41002 786 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 PRLHRP49683 370 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 TAS2R39P59534 338 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 PFN3P60673 137 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 DMWDQ09019 674 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 TTLL9Q3SXZ7 439 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 WDR45BQ5MNZ6 344 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 LPCAT2Q7L5N7 544 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 ABI3BPQ7Z7G0 1075 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 ADGRG6Q86SQ4 1221 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 FRMD1Q8N878 549 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 FUBP1Q96AE4 644 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 MYOCQ99972 504 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 OR2AG1Q9H205 316 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 SPATS2LQ9NUQ6 558 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 MKS1Q9NXB0 559 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 SMG5Q9UPR3 1016 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 OR1A2Q9Y585 309 aa23.26■■□□□ 1.31
TSPAN4-202ENST00000397396 COL6A2P12110 1019 aa23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 MAGOHP61326 146 aaKnown RBP23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 NFATC4Q14934 902 aa23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 KCTD16Q68DU8 428 aa23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 GCNT7Q6ZNI0 430 aa23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 CMC1Q7Z7K0 106 aa23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 EXOC3L1Q86VI1 746 aa23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 DCP2Q8IU60 420 aaKnown RBP23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 MAML2Q8IZL2 1156 aaPredicted RBP23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 CLDN19Q8N6F1 224 aa23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 GAB3Q8WWW8 586 aa23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 ZBTB9Q96C00 473 aa23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 CAB39LQ9H9S4 337 aa23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 GPAMQ9HCL2 828 aa23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 ATXN10Q9UBB4 475 aa23.25■■□□□ 1.31
TSPAN4-202ENST00000397396 INVSQ9Y283 1065 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms