RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ELFN1P0C7U0 828 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 MC4RP32245 332 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 SPRP35270 261 aaPredicted RBP13.14□□□□□ -0.31
SEC13-209ENST00000397117 MMP12P39900 470 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 SLC1A2P43004 574 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 CSE1LP55060 971 aaKnown RBP13.14□□□□□ -0.31
SEC13-209ENST00000397117 CNTN1Q12860 1018 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 CTBP1Q13363 440 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 TEAD4Q15561 434 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 CILP2Q8IUL8 1156 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 DENND6AQ8IWF6 608 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 CYP4X1Q8N118 509 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 C2CD4AQ8NCU7 369 aaPredicted RBP13.14□□□□□ -0.31
SEC13-209ENST00000397117 GANCQ8TET4 914 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.14□□□□□ -0.31
SEC13-209ENST00000397117 MTBPQ96DY7 904 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 ORAI3Q9BRQ5 295 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 EURLQ9NYK6 297 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 APPL1Q9UKG1 709 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 FBXO5Q9UKT4 447 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 SLC30A1Q9Y6M5 507 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 PLXNA2O75051 1894 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 FAM149AA5PLN7 773 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 H0Y8X5 98 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 PLK4O00444 970 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 PFDN6O15212 129 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 MT-ND3P03897 115 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 BPIP17213 487 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 SPAM1P38567 509 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 GRK6P43250 576 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 STC1P52823 247 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 MAGOHP61326 146 aaKnown RBP13.13□□□□□ -0.31
SEC13-209ENST00000397117 RPS14P62263 151 aaKnown RBP13.13□□□□□ -0.31
SEC13-209ENST00000397117 ZRANB3Q5FWF4 1079 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 AARS2Q5JTZ9 985 aaKnown RBP13.13□□□□□ -0.31
SEC13-209ENST00000397117 MROH9Q5TGP6 573 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 FAM151BQ6UXP7 276 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 CBARPQ8N350 705 aaPredicted RBP13.13□□□□□ -0.31
SEC13-209ENST00000397117 GPR150Q8NGU9 434 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 SNX19Q92543 992 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 BIRC7Q96CA5 298 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 CRELD1Q96HD1 420 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 SGSM3Q96HU1 749 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 RBBP8Q99708 897 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 OMDQ99983 421 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 RAD18Q9NS91 495 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 PTPRQQ9UMZ3 2332 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 ARID1BQ8NFD5 2236 aaPredicted RBP13.13□□□□□ -0.31
SEC13-209ENST00000397117 COL5A1P20908 1838 aaPredicted RBP13.13□□□□□ -0.31
SEC13-209ENST00000397117 GLYATL1P3A0A0U1RQE8 302 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 TRIM49D1C9J1S8 452 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 RNASEH2AO75792 299 aaKnown RBP13.13□□□□□ -0.31
SEC13-209ENST00000397117 PRAMEF1O95521 474 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 SEMA4FO95754 770 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 AHSGP02765 367 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 ITGA2BP08514 1039 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 C1SP09871 688 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 ITGALP20701 1170 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 OGNP20774 298 aaKnown RBP13.13□□□□□ -0.31
SEC13-209ENST00000397117 CD27P26842 260 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 CTSKP43235 329 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 CD151P48509 253 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 SPINT3P49223 89 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 MPP1Q00013 466 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 CACNG1Q06432 222 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 SFSWAPQ12872 951 aaKnown RBP13.13□□□□□ -0.31
SEC13-209ENST00000397117 PEX6Q13608 980 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 BMPR2Q13873 1038 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 TTC31Q49AM3 519 aaPredicted RBP13.13□□□□□ -0.31
SEC13-209ENST00000397117 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.13□□□□□ -0.31
SEC13-209ENST00000397117 TAS2R42Q7RTR8 314 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 SRRM1Q8IYB3 904 aaKnown RBP13.13□□□□□ -0.31
SEC13-209ENST00000397117 AADATQ8N5Z0 425 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 TLCD1Q96CP7 247 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 ATXN7L3BQ96GX2 97 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 TTC1Q99614 292 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 WRAP53Q9BUR4 548 aaKnown RBP13.13□□□□□ -0.31
SEC13-209ENST00000397117 IL26Q9NPH9 171 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 FBXO6Q9NRD1 293 aaPredicted RBP13.13□□□□□ -0.31
SEC13-209ENST00000397117 SENP1Q9P0U3 644 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 MARCH4Q9P2E8 410 aaPredicted RBP13.13□□□□□ -0.31
SEC13-209ENST00000397117 SCML1Q9UN30 329 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 ITM2BQ9Y287 266 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 VPS9D1Q9Y2B5 631 aa13.13□□□□□ -0.31
SEC13-209ENST00000397117 A0A1W2PP55 124 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 RGSL1A5PLK6 1076 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 PSMD11O00231 422 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 AREL1O15033 823 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 SRP72O76094 671 aaKnown RBP13.12□□□□□ -0.31
SEC13-209ENST00000397117 F7P08709 466 aaPredicted RBP13.12□□□□□ -0.31
SEC13-209ENST00000397117 HPDP32754 393 aaPredicted RBP13.12□□□□□ -0.31
SEC13-209ENST00000397117 DRD3P35462 400 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 PPARGP37231 505 aaPredicted RBP13.12□□□□□ -0.31
SEC13-209ENST00000397117 LEPRP48357 1165 aaKnown RBP13.12□□□□□ -0.31
SEC13-209ENST00000397117 TTPAP49638 278 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 LIG3P49916 1009 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 CCT8P50990 548 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 LIMK2P53671 638 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 XIAPP98170 497 aa13.12□□□□□ -0.31
SEC13-209ENST00000397117 ZBTB16Q05516 673 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms