RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 PRORYQ9H606 182 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 LRRC40Q9H9A6 602 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 BPIFA1Q9NP55 256 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 WASH6PQ9NQA3 447 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 TBC1D29Q9UFV1 150 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 ACSL6Q9UKU0 697 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 GUCA1BQ9UMX6 200 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 CAPN6Q9Y6Q1 641 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 KIF26BQ2KJY2 2108 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 IGHV1OR21-1A0A087WYE8 117 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 A6NCN8 305 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 CASC3O15234 703 aaKnown RBP13.75□□□□□ -0.21
SEC13-204ENST00000397099 PPM1DO15297 605 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 NVLO15381 856 aaKnown RBP13.75□□□□□ -0.21
SEC13-204ENST00000397099 KLK10O43240 276 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 B4GAT1O43505 415 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 TNFSF15O95150 251 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 AGTP01019 485 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 RALBP11234 206 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 XRCC1P18887 633 aaPredicted RBP13.75□□□□□ -0.21
SEC13-204ENST00000397099 IDSP22304 550 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 CD82P27701 267 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 CD1CP29017 333 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 CHRNA4P43681 627 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 OR1D5P58170 312 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 RPS6KA1Q15418 735 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 LONRF2Q1L5Z9 754 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 AGAP9Q5VTM2 703 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 WDR74Q6RFH5 385 aaPredicted RBP13.75□□□□□ -0.21
SEC13-204ENST00000397099 GPR155Q7Z3F1 870 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 SLITRK4Q8IW52 837 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 LRRC8AQ8IWT6 810 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 CCDC110Q8TBZ0 833 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 MAIP1Q8WWC4 291 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 ULK4Q96C45 1275 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 RTP4Q96DX8 246 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 PRR11Q96HE9 360 aaPredicted RBP13.75□□□□□ -0.21
SEC13-204ENST00000397099 TBL1YQ9BQ87 522 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 KLC4Q9NSK0 619 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 WDR70Q9NW82 654 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 PACSIN2Q9UNF0 486 aaPredicted RBP13.75□□□□□ -0.21
SEC13-204ENST00000397099 KCNK6Q9Y257 313 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 ZKSCAN5Q9Y2L8 839 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 PLEKHM1Q9Y4G2 1056 aa13.75□□□□□ -0.21
SEC13-204ENST00000397099 LILRA5A6NI73 299 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 KALRNO60229 2985 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 PRAMEF1O95521 474 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 GAS8O95995 478 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 UGT1A5P35504 534 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 HALP42357 657 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 LIMK2P53671 638 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 TMPRSS3P57727 454 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 DMPKQ09013 629 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 AMZ1Q400G9 498 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 PHF19Q5T6S3 580 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 AADACL2Q6P093 401 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 TMEM71Q6P5X7 295 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 ABRAXAS1Q6UWZ7 409 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 C4orf22Q6V702 233 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 B3GNT8Q7Z7M8 397 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 TRAPPC5Q8IUR0 188 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 BEND7Q8N7W2 519 aaPredicted RBP13.74□□□□□ -0.21
SEC13-204ENST00000397099 FAM71DQ8N9W8 422 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 ZNF398Q8TD17 642 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 PATE1Q8WXA2 126 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 GORASP1Q9BQQ3 440 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 FOXP3Q9BZS1 431 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 OSGEPL1Q9H4B0 414 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 CPNE7Q9UBL6 633 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 ATXN7L1Q9ULK2 861 aaPredicted RBP13.74□□□□□ -0.21
SEC13-204ENST00000397099 LOXL2Q9Y4K0 774 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 MGAQ8IWI9 3026 aa13.74□□□□□ -0.21
SEC13-204ENST00000397099 PTPRQQ9UMZ3 2332 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 A0A1W2PNU3 283 aaPredicted RBP13.73□□□□□ -0.21
SEC13-204ENST00000397099 CFAP99D6REC4 459 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 F5H423 210 aaPredicted RBP13.73□□□□□ -0.21
SEC13-204ENST00000397099 SNX2O60749 519 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 SRP72O76094 671 aaKnown RBP13.73□□□□□ -0.21
SEC13-204ENST00000397099 AP2A1O95782 977 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 VIPP01282 170 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 MSH3P20585 1137 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 CSTF2P33240 577 aaKnown RBP eCLIP13.73□□□□□ -0.21
SEC13-204ENST00000397099 FDFT1P37268 417 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 NFATC2Q13469 925 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 CHRNA6Q15825 494 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 GPR33Q49SQ1 333 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 MEI1Q5TIA1 1274 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 KCTD11Q693B1 232 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 FAM151BQ6UXP7 276 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 AMZ2Q86W34 360 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 SLC13A5Q86YT5 568 aaPredicted RBP13.73□□□□□ -0.21
SEC13-204ENST00000397099 PLXDC1Q8IUK5 500 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 SFTPA2Q8IWL1 248 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 TRIM48Q8IWZ4 208 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 AGBL5Q8NDL9 886 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 TMEM121Q9BTD3 319 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 ZMYND15Q9H091 742 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 C10orf88Q9H8K7 445 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 HOMER3Q9NSC5 361 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 POT1Q9NUX5 634 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms