RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 C9orf57Q5W0N0 161 aa10.19□□□□□ -0.78
LIMCH1-203ENST00000396595 KLHL5Q96PQ7 755 aa10.19□□□□□ -0.78
LIMCH1-203ENST00000396595 ZNF490Q9ULM2 529 aaPredicted RBP10.19□□□□□ -0.78
LIMCH1-203ENST00000396595 TEX46H3BTG2 121 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 ZW10O43264 779 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 TLR5O60602 858 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 CTPS1P17812 591 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 FECHP22830 423 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 UGT1A5P35504 534 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 PTPN9P43378 593 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 GRM3Q14832 879 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 CCNYL2Q5T2Q4 361 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 KCTD15Q96SI1 283 aaPredicted RBP10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 AIFM2Q9BRQ8 373 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 COPS4Q9BT78 406 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 GATA5Q9BWX5 397 aaPredicted RBP10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 SAV1Q9H4B6 383 aaPredicted RBP10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 AGO3Q9H9G7 860 aaKnown RBP10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 SLC35C2Q9NQQ7 365 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 TRPS1Q9UHF7 1281 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 OR10H1Q9Y4A9 318 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 CLDN25C9JDP6 229 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 PDLIM1O00151 329 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 SLC22A2O15244 555 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 OR10H2O60403 315 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 IFNA7P01567 189 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 FGBP02675 491 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 RGS1Q08116 209 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 LCP2Q13094 533 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 PARP15Q460N3 678 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 PPM1JQ5JR12 505 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 ANKRD22Q5VYY1 191 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 FAM151BQ6UXP7 276 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 CERS6Q6ZMG9 384 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 APOLD1Q96LR9 279 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 B3GNT5Q9BYG0 378 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 GRHL1Q9NZI5 618 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 FAM172BPA6NC97 362 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 CHST10O43529 356 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 NDST3O95803 873 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 SDC2P34741 201 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 MAGEA6P43360 314 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 PTPN5P54829 565 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 VPS26BQ4G0F5 336 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 ZDHHC20Q5W0Z9 365 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 ZNF572Q7Z3I7 529 aaPredicted RBP10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 P2RY8Q86VZ1 359 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 ZZZ3Q8IYH5 903 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 UBR7Q8N806 425 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 NODALQ96S42 347 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 C1QTNF1Q9BXJ1 281 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 ALG2Q9H553 416 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 C3orf14Q9HBI5 128 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 NUDT4Q9NZJ9 180 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 OR6C75A6NL08 312 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 PQBP1O60828 265 aaKnown RBP10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 LGR5O75473 907 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 OR5F1O95221 314 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 PRKAR2AP13861 404 aaKnown RBP10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 TAS2R41P59536 307 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 NRG1Q02297 640 aaPredicted RBP10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 VGLL4Q14135 290 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 KCNA10Q16322 511 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 CYP1B1Q16678 543 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 ALG11Q2TAA5 492 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 VWA5B1Q5TIE3 1220 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 RPTNQ6XPR3 784 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 TMPRSS11AQ6ZMR5 421 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 RALGPS2Q86X27 583 aaPredicted RBP10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 NETO2Q8NC67 525 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 STYXQ8WUJ0 223 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 MYO19Q96H55 970 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 CHRAC1Q9NRG0 131 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 RASSF1Q9NS23 344 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 MAFFQ9ULX9 164 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 RBM47A0AV96 593 aaKnown RBP10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 FAM86C2PA6NEL3 165 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 NPHS1O60500 1241 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 FESP07332 822 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 SNHG28P0DPA3 235 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 CDH5P33151 784 aaPredicted RBP10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 MANFP55145 182 aaKnown RBP10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 SMAD3P84022 425 aaKnown RBP10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 KCTD19Q17RG1 926 aaPredicted RBP10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 ABHD15Q6UXT9 468 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 CHSY3Q70JA7 882 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 GALNT5Q7Z7M9 940 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 IQCF2Q8IXL9 164 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 SVOPLQ8N434 492 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 BANPQ8N9N5 519 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 BTN2A3PQ96KV6 586 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 DMRTB1Q96MA1 342 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 MTFR1LQ9H019 292 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 ABCG8Q9H221 673 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 IKZF4Q9H2S9 585 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 C12orf65Q9H3J6 166 aaKnown RBP10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 EXD2Q9NVH0 621 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 PCDHGA4Q9Y5G9 962 aa10.18□□□□□ -0.78
LIMCH1-203ENST00000396595 COL1A2P08123 1366 aa10.17□□□□□ -0.78
LIMCH1-203ENST00000396595 TBC1D3BA6NDS4 549 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms