RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 CCL4L1Q8NHW4 92 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 GPBAR1Q8TDU6 330 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 SCG3Q8WXD2 468 aaKnown RBP18.96■□□□□ 0.63
HOXA9-202ENST00000396345 ZNF669Q96BR6 464 aaPredicted RBP18.96■□□□□ 0.63
HOXA9-202ENST00000396345 TRIM56Q9BRZ2 755 aaKnown RBP18.96■□□□□ 0.63
HOXA9-202ENST00000396345 DUSP23Q9BVJ7 150 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 GSDMCQ9BYG8 508 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 SLC32A1Q9H598 525 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 PCOLCE2Q9UKZ9 415 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 PLEKHM1Q9Y4G2 1056 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 RPS6KL1Q9Y6S9 549 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 ARID1BQ8NFD5 2236 aaPredicted RBP18.96■□□□□ 0.63
HOXA9-202ENST00000396345 CFAP99D6REC4 459 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 TRIM38O00635 465 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 TPP1O14773 563 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 KMOO15229 486 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 VAPBO95292 243 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 POLBP06746 335 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 CSRP1P21291 193 aaKnown RBP18.95■□□□□ 0.62
HOXA9-202ENST00000396345 CTBSQ01459 385 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 GUCY2DQ02846 1103 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 CAV1Q03135 178 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 LRP8Q14114 963 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 TRADDQ15628 312 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 DBN1Q16643 649 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 LYPLAL1Q5VWZ2 237 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 KIAA0930Q6ICG6 404 aaPredicted RBP18.95■□□□□ 0.62
HOXA9-202ENST00000396345 LVRNQ6Q4G3 990 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 TMEM220Q6QAJ8 160 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 CRTC3Q6UUV7 619 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 NRROSQ86YC3 692 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 TRAPPC5Q8IUR0 188 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 DEFB124Q8NES8 71 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 ART4Q93070 314 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 FCRL3Q96P31 734 aaPredicted RBP18.95■□□□□ 0.62
HOXA9-202ENST00000396345 TTC1Q99614 292 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 EBNA1BP2Q99848 306 aaKnown RBP18.95■□□□□ 0.62
HOXA9-202ENST00000396345 L2HGDHQ9H9P8 463 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 CATSPERZQ9NTU4 200 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 DLL3Q9NYJ7 618 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 DNAH14Q0VDD8 3507 aa18.95■□□□□ 0.62
HOXA9-202ENST00000396345 SPTBN4Q9H254 2564 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 CD3EAPO15446 510 aaKnown RBP18.94■□□□□ 0.62
HOXA9-202ENST00000396345 SIGLEC6O43699 453 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 CBFA2T3O75081 653 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 USP1O94782 785 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 PGAM1P18669 254 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 AK4P27144 223 aaPredicted RBP18.94■□□□□ 0.62
HOXA9-202ENST00000396345 ARNTP27540 789 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 ELK3P41970 407 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 PLTPP55058 493 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 B4GALNT1Q00973 533 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 FOXK2Q01167 660 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 AARS2Q5JTZ9 985 aaKnown RBP18.94■□□□□ 0.62
HOXA9-202ENST00000396345 HP1BP3Q5SSJ5 553 aaPredicted RBP18.94■□□□□ 0.62
HOXA9-202ENST00000396345 CERS6Q6ZMG9 384 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 DET1Q7L5Y6 550 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 LRRC39Q96DD0 335 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 SGF29Q96ES7 293 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 ZNF514Q96K75 400 aaPredicted RBP18.94■□□□□ 0.62
HOXA9-202ENST00000396345 CDC6Q99741 560 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 NAT9Q9BTE0 207 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 FTSJ1Q9UET6 329 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 GPR34Q9UPC5 381 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 ST14Q9Y5Y6 855 aa18.94■□□□□ 0.62
HOXA9-202ENST00000396345 IGLV3-16A0A075B6K0 115 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 ZCWPW2A0A1B0GU75 182 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 ESYT3A0FGR9 886 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 OR2AG2A6NM03 316 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 LDOC1O95751 146 aaPredicted RBP18.93■□□□□ 0.62
HOXA9-202ENST00000396345 TTC4O95801 387 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 ACP5P13686 325 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 ATP1B2P14415 290 aaPredicted RBP18.93■□□□□ 0.62
HOXA9-202ENST00000396345 PPARGP37231 505 aaPredicted RBP18.93■□□□□ 0.62
HOXA9-202ENST00000396345 ACTR1BP42025 376 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 ARCN1P48444 511 aaKnown RBP18.93■□□□□ 0.62
HOXA9-202ENST00000396345 CTSCP53634 463 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 ACTR1AP61163 376 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 PDIA2Q13087 525 aaKnown RBP18.93■□□□□ 0.62
HOXA9-202ENST00000396345 ITIH4Q14624 930 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 SMAD1Q15797 465 aaKnown RBP18.93■□□□□ 0.62
HOXA9-202ENST00000396345 PLA2G4EQ3MJ16 856 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 SLC30A9Q6PML9 568 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 CCNJLQ8IV13 435 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 ZNF547Q8IVP9 402 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 IGDCC3Q8IVU1 814 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 OTUD6BQ8N6M0 293 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 PNPLA1Q8N8W4 532 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 FAM46DQ8NEK8 389 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 BAHD1Q8TBE0 780 aaPredicted RBP18.93■□□□□ 0.62
HOXA9-202ENST00000396345 SEC14L1Q92503 715 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 CCDC97Q96F63 343 aaPredicted RBP18.93■□□□□ 0.62
HOXA9-202ENST00000396345 CNDP2Q96KP4 475 aaKnown RBP18.93■□□□□ 0.62
HOXA9-202ENST00000396345 BOCQ9BWV1 1114 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 EPB41L5Q9HCM4 733 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 TAAR2Q9P1P5 351 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 MARCH4Q9P2E8 410 aaPredicted RBP18.93■□□□□ 0.62
HOXA9-202ENST00000396345 DMGDHQ9UI17 866 aaKnown RBP18.93■□□□□ 0.62
HOXA9-202ENST00000396345 TEX264Q9Y6I9 313 aa18.93■□□□□ 0.62
HOXA9-202ENST00000396345 DCDC2BA2VCK2 349 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms