RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 SOD1P00441 154 aa20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 LTA4HP09960 611 aaKnown RBP20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 ATP1B2P14415 290 aaPredicted RBP20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 ZNF37AP17032 561 aaPredicted RBP20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 SKIV2L2P42285 1042 aaKnown RBP20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 SGCGQ13326 291 aa20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 AGERQ15109 404 aa20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 TSNAXIP1Q2TAA8 658 aa20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 CCDC153Q494R4 210 aa20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 TMEM207Q6UWW9 146 aa20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 PHYKPLQ8IUZ5 450 aa20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 KDM4CQ9H3R0 1056 aa20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 SARS2Q9NP81 518 aaKnown RBP20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 EMCNQ9ULC0 261 aa20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 OAS3Q9Y6K5 1087 aaKnown RBP20.19■□□□□ 0.82
VCPKMT-202ENST00000395860 PLIN3O60664 434 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 OR56A5P0C7T3 313 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 DHRS4L1P0CG22 281 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 SLC26A3P40879 764 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 KPNA2P52292 529 aaKnown RBP20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 DLG1Q12959 904 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 FAM83EQ2M2I3 478 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 AGAP9Q5VTM2 703 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 ANO7Q6IWH7 933 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 NEK5Q6P3R8 708 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 PAQR3Q6TCH7 311 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 SPNS2Q8IVW8 549 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 SPATA6LQ8N4H0 392 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 SIDT2Q8NBJ9 832 aaKnown RBP20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 TSTD1Q8NFU3 115 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 ANKRD49Q8WVL7 239 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 SCYL1Q96KG9 808 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 UBXN10Q96LJ8 280 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 NMRAL1Q9HBL8 299 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 ITM2CQ9NQX7 267 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 C2orf42Q9NWW7 574 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 GALPQ9UBC7 116 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 NUMA1Q14980 2115 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 TRIM16O95361 564 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 PAK4O96013 591 aaPredicted RBP20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 PROCP04070 461 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 PCCBP05166 539 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 ITGB6P18564 788 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 GLRBP48167 497 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 ZNF648Q5T619 568 aaPredicted RBP20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 LRRC8EQ6NSJ5 796 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 DET1Q7L5Y6 550 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 HORMAD1Q86X24 394 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 PJA1Q8NG27 643 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 KLK6Q92876 244 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 PANX3Q96QZ0 392 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 UNKQ9C0B0 810 aaKnown RBP20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 BTBD1Q9H0C5 482 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 IGSF5Q9NSI5 407 aa20.18■□□□□ 0.82
VCPKMT-202ENST00000395860 WDR91A4D1P6 747 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 LSP1P33241 339 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 SERPINB4P48594 390 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 CLCN7P51798 805 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 WSCD2Q2TBF2 565 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 MAP7D1Q3KQU3 841 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 KHDC1Q4VXA5 237 aaKnown RBP20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 TMEM259Q4ZIN3 620 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 PNCKQ6P2M8 343 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 KLC3Q6P597 504 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 PLA2G15Q8NCC3 412 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 CD200R1Q8TD46 325 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 CKAP2Q8WWK9 683 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 HHIPQ96QV1 700 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 SLC30A3Q99726 388 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 C1QTNF7Q9BXJ2 289 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 C1QTNF2Q9BXJ5 285 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 SLC17A9Q9BYT1 436 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 EBF1Q9UH73 591 aa20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 CNOT6Q9ULM6 557 aaKnown RBP20.17■□□□□ 0.82
VCPKMT-202ENST00000395860 COL6A3P12111 3177 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 SHOX2O60902 331 aaPredicted RBP20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 APOA4P06727 396 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 ACSL1P33121 698 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 FGL2Q14314 439 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 FSTL5Q8N475 847 aaPredicted RBP20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 NKAPQ8N5F7 415 aaKnown RBP20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 LKAAEAR1Q8TD35 194 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 MAGEB18Q96M61 343 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 GPR78Q96P69 363 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 SGK2Q9HBY8 427 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 CD320Q9NPF0 282 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 USP36Q9P275 1121 aaKnown RBP20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 DHRS7Q9Y394 339 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 LRRC72A6NJI9 287 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 F8W8V4 182 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 AP2A2O94973 939 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 NEFHP12036 1026 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 MAT2AP31153 395 aaKnown RBP20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 PPP2CBP62714 309 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 PPP2CAP67775 309 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 TMEM115Q12893 351 aaPredicted RBP20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 IRF4Q15306 451 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 TMEM31Q5JXX7 168 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 TP53I13Q8NBR0 393 aaPredicted RBP20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 OR2T34Q8NGX1 318 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms