RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 MAPK10P53779 464 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 NFATC3Q12968 1075 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 SPA17Q15506 151 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 PLA2G4EQ3MJ16 856 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 MAP9Q49MG5 647 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 ZNF569Q5MCW4 686 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 TMEM71Q6P5X7 295 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 RANBP10Q6VN20 620 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 FAM83HQ6ZRV2 1179 aaPredicted RBP8.73□□□□□ -1.01
ATG4A-205ENST00000394892 PID1Q7Z2X4 250 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 VASH2Q86V25 355 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 JAMLQ86YT9 394 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 TMTC1Q8IUR5 882 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 ZSCAN1Q8NBB4 408 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 IPMKQ8NFU5 416 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 OR4D9Q8NGE8 314 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 P3H4Q92791 437 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 APOL2Q9BQE5 337 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 DESI2Q9BSY9 194 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 ZSCAN5AQ9BUG6 496 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 OSBPL8Q9BZF1 889 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 GBA3Q9H227 469 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 RMI1Q9H9A7 625 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 KLC4Q9NSK0 619 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 KCNK4Q9NYG8 393 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 KLHL8Q9P2G9 620 aaPredicted RBP8.73□□□□□ -1.01
ATG4A-205ENST00000394892 IL17BQ9UHF5 180 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 PACSIN2Q9UNF0 486 aaPredicted RBP8.73□□□□□ -1.01
ATG4A-205ENST00000394892 WDR37Q9Y2I8 494 aa8.73□□□□□ -1.01
ATG4A-205ENST00000394892 R3HDM2Q9Y2K5 976 aaKnown RBP8.73□□□□□ -1.01
ATG4A-205ENST00000394892 OR52A4PA6NMU1 304 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 HACD1B0YJ81 288 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 PYCARD-AS1I3L0S3 204 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 HGSO14964 777 aaPredicted RBP8.72□□□□□ -1.01
ATG4A-205ENST00000394892 JMJD7P0C870 316 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 F3P13726 295 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 PSMB4P28070 264 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 VAV2P52735 878 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 GFERP55789 205 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 XIAPP98170 497 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 HHEXQ03014 270 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 XRCC4Q13426 336 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 SPARCL1Q14515 664 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 CLCA4Q14CN2 919 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 CLPPQ16740 277 aaPredicted RBP8.72□□□□□ -1.01
ATG4A-205ENST00000394892 LINC00303Q3SY05 128 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 PDPK2PQ6A1A2 396 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 FAM151BQ6UXP7 276 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 ATG14Q6ZNE5 492 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 CCDC50Q8IVM0 306 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 RASGEF1AQ8N9B8 481 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 EXD3Q8N9H8 876 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 CCDC110Q8TBZ0 833 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 JPH3Q8WXH2 748 aaPredicted RBP8.72□□□□□ -1.01
ATG4A-205ENST00000394892 ART4Q93070 314 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 RNF31Q96EP0 1072 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 RBM41Q96IZ5 413 aaKnown RBP8.72□□□□□ -1.01
ATG4A-205ENST00000394892 VPS35Q96QK1 796 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 CMKLR1Q99788 373 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 FICDQ9BVA6 458 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 APMAPQ9HDC9 416 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 HAUS2Q9NVX0 235 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 CPNE7Q9UBL6 633 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 EFR3BQ9Y2G0 817 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 DNAJC16Q9Y2G8 782 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 PCDHB11Q9Y5F2 797 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 PCDHGA3Q9Y5H0 932 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 B3GALT1Q9Y5Z6 326 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 ARL5AQ9Y689 179 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 ARHGEF17Q96PE2 2063 aaPredicted RBP8.72□□□□□ -1.01
ATG4A-205ENST00000394892 BSNQ9UPA5 3926 aa8.72□□□□□ -1.01
ATG4A-205ENST00000394892 A8MU76 341 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-205ENST00000394892 H7C0C1 242 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 CCL22O00626 93 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 MTSS1O43312 755 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 CDK14O94921 469 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 METTL18O95568 372 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 FTCDO95954 541 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 ITGB2P05107 769 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 PRSS56P0CW18 603 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 RBP3P10745 1247 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 LIPCP11150 499 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 XRCC1P18887 633 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-205ENST00000394892 RPL10P27635 214 aaKnown RBP8.71□□□□□ -1.02
ATG4A-205ENST00000394892 ATP5OP48047 213 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 DRG2P55039 364 aaKnown RBP8.71□□□□□ -1.02
ATG4A-205ENST00000394892 GDF10P55107 478 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 EIF3EP60228 445 aaKnown RBP8.71□□□□□ -1.02
ATG4A-205ENST00000394892 COPS2P61201 443 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 PPP1CAP62136 330 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 CYP4F2P78329 520 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 GPLD1P80108 840 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 TMEM115Q12893 351 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-205ENST00000394892 KLF1Q13351 362 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-205ENST00000394892 MPP3Q13368 585 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 TRA2AQ13595 282 aaKnown RBP eCLIP8.71□□□□□ -1.02
ATG4A-205ENST00000394892 PEX6Q13608 980 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 SEPT7Q16181 437 aaKnown RBP8.71□□□□□ -1.02
ATG4A-205ENST00000394892 ANKRD20A2Q5SQ80 823 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms