RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 ZNF296Q8WUU4 475 aaPredicted RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 ACOT11Q8WXI4 607 aaPredicted RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 NSMCE3Q96MG7 304 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 PPM1MQ96MI6 270 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 AGO3Q9H9G7 860 aaKnown RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 DNAJC28Q9NX36 388 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 CNTN3Q9P232 1028 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 STOML2Q9UJZ1 356 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 GABRQQ9UN88 632 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 RUVBL2Q9Y230 463 aaKnown RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 EYSQ5T1H1 3165 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 NT5C1B-RDH14C9J2C7 533 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 K7ERQ8 282 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 L7N2F9 121 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 CLDN5O00501 218 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 PIRO00625 290 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 TRUB2O95900 331 aaKnown RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 ERCC2P18074 760 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 IL10P22301 178 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 GCAP28676 217 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 ZNF143P52747 638 aaPredicted RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 LILRA4P59901 499 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 VAMP2P63027 116 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 IL18R1Q13478 541 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 CBFBQ13951 182 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 LRRC14Q15048 493 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 TRIM16LQ309B1 348 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 CARD16Q5EG05 197 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 NHSL2Q5HYW2 709 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 PAGE2BQ5JRK9 111 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 SPDYCQ5MJ68 293 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 FBXO47Q5MNV8 452 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 INTS11Q5TA45 600 aaKnown RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 RNASEH2BQ5TBB1 312 aaKnown RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 OSTM1Q86WC4 334 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 SMYD1Q8NB12 490 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 TSPEARQ8WU66 669 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 ATXN2LQ8WWM7 1075 aaKnown RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 ZNF669Q96BR6 464 aaPredicted RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 ERLEC1Q96DZ1 483 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 C5orf34Q96MH7 638 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 PCDHB16Q9NRJ7 776 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 CENPMQ9NSP4 180 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 GRHPRQ9UBQ7 328 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 SZT2Q5T011 3432 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 XIRP2A4UGR9 3374 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 CLOCKO15516 846 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 B4GAT1O43505 415 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 GPRIN2O60269 458 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 PPM1BO75688 479 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 CABYRO75952 493 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 CTSHP09668 335 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 CALCBP10092 127 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 PPP3CBP16298 524 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 PTBP1P26599 531 aaKnown RBP eCLIP5.79□□□□□ -1.482e-8■■■□□ 16
MATR3-230ENST00000394800 RPL22P35268 128 aaKnown RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 SMSP52788 366 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 CDH6P55285 790 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 FSCN1Q16658 493 aaKnown RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 PAN2Q504Q3 1202 aaKnown RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 KIAA0319Q5VV43 1072 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 WDR73Q6P4I2 378 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 COMMD1Q8N668 190 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 FRMD1Q8N878 549 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 LSMEM1Q8N8F7 131 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 ADCY4Q8NFM4 1077 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 FAXDC2Q96IV6 333 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 TMEM109Q9BVC6 243 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 SLC4A5Q9BY07 1137 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 CDH19Q9H159 772 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 UPF3AQ9H1J1 476 aaKnown RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 MIOSQ9NXC5 875 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 GIT1Q9Y2X7 761 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 KDM4BO94953 1096 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 DLGAP3O95886 979 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 AMHP03971 560 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 FCER2P06734 321 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 RRM2P31350 389 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 EIF1AXP47813 144 aaKnown RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 PCDH1Q08174 1060 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 DDR2Q16832 855 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 XKR4Q5GH76 650 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 GNASQ5JWF2 1037 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 VSTM1Q6UX27 236 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 PAQR9Q6ZVX9 377 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 PAGE2Q7Z2X7 111 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 PTRH1Q86Y79 214 aaKnown RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 AGGF1Q8N302 714 aaeCLIP5.79□□□□□ -1.481e-9■□□□□ 10.7
MATR3-230ENST00000394800 FANK1Q8TC84 345 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 RAB24Q969Q5 203 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 ZNF317Q96PQ6 595 aaPredicted RBP5.79□□□□□ -1.48
MATR3-230ENST00000394800 SPACA1Q9HBV2 294 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 TMPRSS4Q9NRS4 437 aa5.79□□□□□ -1.48
MATR3-230ENST00000394800 URADA6NGE7 173 aa5.78□□□□□ -1.48
MATR3-230ENST00000394800 PSMD12O00232 456 aaPredicted RBP5.78□□□□□ -1.48
MATR3-230ENST00000394800 HDAC3O15379 428 aa5.78□□□□□ -1.48
MATR3-230ENST00000394800 RARBP10826 455 aa5.78□□□□□ -1.48
MATR3-230ENST00000394800 ADORA2BP29275 332 aa5.78□□□□□ -1.48
MATR3-230ENST00000394800 RPL10AP62906 217 aaKnown RBP5.78□□□□□ -1.48
MATR3-230ENST00000394800 DPYSL3Q14195 570 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms