RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 INPP5AQ14642 412 aa16.49■□□□□ 0.23
PRDM5-202ENST00000394435 PABPC1LQ4VXU2 614 aaKnown RBP16.49■□□□□ 0.23
PRDM5-202ENST00000394435 ADGRF1Q5T601 910 aa16.49■□□□□ 0.23
PRDM5-202ENST00000394435 IRAK1BP1Q5VVH5 260 aa16.49■□□□□ 0.23
PRDM5-202ENST00000394435 PPP4R4Q6NUP7 873 aa16.49■□□□□ 0.23
PRDM5-202ENST00000394435 KLHDC10Q6PID8 442 aa16.49■□□□□ 0.23
PRDM5-202ENST00000394435 NCEH1Q6PIU2 408 aa16.49■□□□□ 0.23
PRDM5-202ENST00000394435 GPRIN3Q6ZVF9 776 aa16.49■□□□□ 0.23
PRDM5-202ENST00000394435 CDYL2Q8N8U2 506 aa16.49■□□□□ 0.23
PRDM5-202ENST00000394435 TMEM175Q9BSA9 504 aa16.49■□□□□ 0.23
PRDM5-202ENST00000394435 TSEN34Q9BSV6 310 aaKnown RBP16.49■□□□□ 0.23
PRDM5-202ENST00000394435 DUS2Q9NX74 493 aaKnown RBP16.49■□□□□ 0.23
PRDM5-202ENST00000394435 ACTR3BQ9P1U1 418 aa16.49■□□□□ 0.23
PRDM5-202ENST00000394435 TET1Q8NFU7 2136 aa16.49■□□□□ 0.23
PRDM5-202ENST00000394435 ARHGAP10A1A4S6 786 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 E2F3O00716 465 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 ARPC2O15144 300 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 PFDN6O15212 129 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 SPATA31D3P0C874 917 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 MTHFD1P11586 935 aaKnown RBP16.48■□□□□ 0.23
PRDM5-202ENST00000394435 MZF1P28698 734 aaPredicted RBP16.48■□□□□ 0.23
PRDM5-202ENST00000394435 OXTRP30559 389 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 TUFMP49411 452 aaKnown RBP16.48■□□□□ 0.23
PRDM5-202ENST00000394435 C18orf21Q32NC0 220 aaPredicted RBP16.48■□□□□ 0.23
PRDM5-202ENST00000394435 COQ5Q5HYK3 327 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 LHX8Q68G74 356 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 SLC8B1Q6J4K2 584 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 LCN8Q6JVE9 175 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 SPATA31D4Q6ZUB0 917 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 OR52B6Q8NGF0 335 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 ZFP28Q8NHY6 868 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 SMPD4Q9NXE4 827 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 TRPM5Q9NZQ8 1165 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 GIPC1O14908 333 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 HNRNPRO43390 633 aaKnown RBP16.48■□□□□ 0.23
PRDM5-202ENST00000394435 SLC22A3O75751 556 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 PRAMEF12O95522 483 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 ALDH1A1P00352 501 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 C1RP00736 705 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 NCK1P16333 377 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 CTPS1P17812 591 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 GSK3BP49841 420 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 PLOD1Q02809 727 aaPredicted RBP16.48■□□□□ 0.23
PRDM5-202ENST00000394435 FOXM1Q08050 763 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 TWF1Q12792 350 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 PLD1Q13393 1074 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 DYNC1I2Q13409 638 aaKnown RBP16.48■□□□□ 0.23
PRDM5-202ENST00000394435 RCAN2Q14206 197 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 EFL1Q7Z2Z2 1120 aaKnown RBP16.48■□□□□ 0.23
PRDM5-202ENST00000394435 CARNMT1Q8N4J0 409 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 GRIN3AQ8TCU5 1115 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 DDI1Q8WTU0 396 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 RPL10LQ96L21 214 aaKnown RBP16.48■□□□□ 0.23
PRDM5-202ENST00000394435 RBM38Q9H0Z9 239 aaKnown RBP16.48■□□□□ 0.23
PRDM5-202ENST00000394435 CWH43Q9H720 699 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 SLAMF8Q9P0V8 285 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 MTRRQ9UBK8 725 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 LHX3Q9UBR4 397 aa16.48■□□□□ 0.23
PRDM5-202ENST00000394435 CCDC154A6NI56 674 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 PDLIM1O00151 329 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 IL10P22301 178 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 PSMA4P25789 261 aaKnown RBP16.47■□□□□ 0.23
PRDM5-202ENST00000394435 ARL1P40616 181 aaPredicted RBP16.47■□□□□ 0.23
PRDM5-202ENST00000394435 CLCN4P51793 760 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 POLR2JP52435 117 aaKnown RBP16.47■□□□□ 0.23
PRDM5-202ENST00000394435 RBBP5Q15291 538 aaKnown RBP16.47■□□□□ 0.23
PRDM5-202ENST00000394435 TGFBIQ15582 683 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 NHSL2Q5HYW2 709 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 HABP4Q5JVS0 413 aaKnown RBP16.47■□□□□ 0.23
PRDM5-202ENST00000394435 ATXN7L2Q5T6C5 722 aaPredicted RBP16.47■□□□□ 0.23
PRDM5-202ENST00000394435 ADGRG5Q8IZF4 528 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 CBR4Q8N4T8 237 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 TSPAN14Q8NG11 270 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 OVCA2Q8WZ82 227 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 SEPT8Q92599 483 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 KCNJ9Q92806 393 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 CCDC97Q96F63 343 aaPredicted RBP16.47■□□□□ 0.23
PRDM5-202ENST00000394435 MPP4Q96JB8 637 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 TMEM74Q96NL1 305 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 CAAP1Q9H8G2 361 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 PADI4Q9UM07 663 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 FCF1Q9Y324 198 aaKnown RBP16.47■□□□□ 0.23
PRDM5-202ENST00000394435 PCDHB9Q9Y5E1 797 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.47■□□□□ 0.23
PRDM5-202ENST00000394435 CLGNO14967 610 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 IL12AP29459 219 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 NR1H2P55055 460 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 ERVPABLB-1P60509 514 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 LIPEQ05469 1076 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 TIGD2Q4W5G0 525 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 KRT80Q6KB66 452 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 EPHX4Q8IUS5 362 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 TTC16Q8NEE8 873 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 CD99L2Q8TCZ2 262 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 EID2BQ96D98 161 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 KLF16Q9BXK1 252 aaPredicted RBP16.47■□□□□ 0.23
PRDM5-202ENST00000394435 MRPL9Q9BYD2 267 aaKnown RBP16.47■□□□□ 0.23
PRDM5-202ENST00000394435 TRIM54Q9BYV2 358 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 BRINP2Q9C0B6 783 aa16.47■□□□□ 0.23
PRDM5-202ENST00000394435 H0Y626 953 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms