RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 AIF1P55008 147 aa18.71■□□□□ 0.59
HOXC6-202ENST00000394331 C1QTNF8P60827 252 aa18.71■□□□□ 0.59
HOXC6-202ENST00000394331 CTAG1AP78358 180 aa18.71■□□□□ 0.59
HOXC6-202ENST00000394331 ZNF45Q02386 682 aa18.71■□□□□ 0.59
HOXC6-202ENST00000394331 FXNQ16595 210 aa18.71■□□□□ 0.59
HOXC6-202ENST00000394331 TMEM236Q5W0B7 351 aa18.71■□□□□ 0.59
HOXC6-202ENST00000394331 PAGE2Q7Z2X7 111 aa18.71■□□□□ 0.59
HOXC6-202ENST00000394331 ZNF598Q86UK7 904 aaKnown RBP18.71■□□□□ 0.59
HOXC6-202ENST00000394331 ZC3HC1Q86WB0 502 aaKnown RBP18.71■□□□□ 0.59
HOXC6-202ENST00000394331 OSTM1Q86WC4 334 aa18.71■□□□□ 0.59
HOXC6-202ENST00000394331 GALNT12Q8IXK2 581 aa18.71■□□□□ 0.59
HOXC6-202ENST00000394331 CENPLQ8N0S6 344 aaPredicted RBP18.71■□□□□ 0.59
HOXC6-202ENST00000394331 CLYBLQ8N0X4 340 aa18.71■□□□□ 0.59
HOXC6-202ENST00000394331 ZNF567Q8N184 647 aa18.71■□□□□ 0.59
HOXC6-202ENST00000394331 PJA1Q8NG27 643 aa18.71■□□□□ 0.59
HOXC6-202ENST00000394331 JPH3Q8WXH2 748 aaPredicted RBP18.71■□□□□ 0.59
HOXC6-202ENST00000394331 XPR1Q9UBH6 696 aa18.71■□□□□ 0.59
HOXC6-202ENST00000394331 PCDHB3Q9Y5E6 796 aa18.71■□□□□ 0.59
HOXC6-202ENST00000394331 SYNJ2BP-COX16A0A087WUM0 186 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 AXIN1O15169 862 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 TBC1D4O60343 1298 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 SOAT2O75908 522 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 SNX4O95219 450 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 SLC35E2BP0CK96 405 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 TRAPPC2P0DI81 140 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 TRAPPC2BP0DI82 140 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 SOX4Q06945 474 aaPredicted RBP18.7■□□□□ 0.58
HOXC6-202ENST00000394331 PID1Q7Z2X4 250 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 CCNYL1Q8N7R7 359 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 SLC2A13Q96QE2 648 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 RNF39Q9H2S5 420 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 COX16Q9P0S2 106 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.7■□□□□ 0.58
HOXC6-202ENST00000394331 SBF1O95248 1867 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 SLC1A7O00341 560 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 HAT1O14929 419 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 ARL1P40616 181 aaPredicted RBP18.7■□□□□ 0.58
HOXC6-202ENST00000394331 PITX1P78337 314 aaPredicted RBP18.7■□□□□ 0.58
HOXC6-202ENST00000394331 TSPY1Q01534 308 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 FADDQ13158 208 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 SYT6Q5T7P8 510 aaPredicted RBP18.7■□□□□ 0.58
HOXC6-202ENST00000394331 LARP4Q71RC2 724 aaKnown RBP eCLIP18.7■□□□□ 0.58
HOXC6-202ENST00000394331 RIMKLAQ8IXN7 391 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 SLC43A3Q8NBI5 491 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 DNAJB3Q8WWF6 145 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 GPR78Q96P69 363 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 ALOXE3Q9BYJ1 711 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 OSBPL2Q9H1P3 480 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 RHOJQ9H4E5 214 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 GOLGA2P5Q9HBQ8 144 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 FAM118AQ9NWS6 357 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 GRIP1Q9Y3R0 1128 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 UNCXA6NJT0 531 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 UPK1AO00322 258 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 SHOXO15266 292 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 KATNA1O75449 491 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 GTF2A2P52657 109 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 GALNT3Q14435 633 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 YIF1BQ5BJH7 314 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 SNAP47Q5SQN1 464 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 UBXN11Q5T124 520 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 CES3Q6UWW8 571 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 UBQLNLQ8IYU4 475 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 RORBQ92753 470 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 NTN4Q9HB63 628 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 IL37Q9NZH6 218 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 SLC39A10Q9ULF5 831 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 PLXNB2O15031 1838 aa18.7■□□□□ 0.58
HOXC6-202ENST00000394331 CCL15-CCL14A0A0B4J2E2 113 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 PDZK1P1A8MUH7 402 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 DCLK1O15075 740 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 ZW10O43264 779 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 TBX1O43435 398 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 DEFA1P59665 94 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 DEFA3P59666 94 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 RACK1P63244 317 aaKnown RBP18.69■□□□□ 0.58
HOXC6-202ENST00000394331 EMX1Q04741 257 aaPredicted RBP18.69■□□□□ 0.58
HOXC6-202ENST00000394331 CCL15Q16663 113 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 PPP1R3AQ16821 1122 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 PLEKHH3Q7Z736 793 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 OR9I1Q8NGQ6 314 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 MCFD2Q8NI22 146 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 FBLIM1Q8WUP2 373 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 KCTD4Q8WVF5 259 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 CEP41Q9BYV8 373 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 MKRN2Q9H000 416 aaKnown RBP18.69■□□□□ 0.58
HOXC6-202ENST00000394331 EPS8L2Q9H6S3 715 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 PIH1D1Q9NWS0 290 aaKnown RBP18.69■□□□□ 0.58
HOXC6-202ENST00000394331 KLHL8Q9P2G9 620 aaPredicted RBP18.69■□□□□ 0.58
HOXC6-202ENST00000394331 FBXO9Q9UK97 447 aaPredicted RBP18.69■□□□□ 0.58
HOXC6-202ENST00000394331 NCAM2O15394 837 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 CTRB1P17538 263 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 ATP5F1P24539 256 aaPredicted RBP18.69■□□□□ 0.58
HOXC6-202ENST00000394331 ADRA1BP35368 520 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 UGT2B10P36537 528 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 KPNA2P52292 529 aaKnown RBP18.69■□□□□ 0.58
HOXC6-202ENST00000394331 PRKCDQ05655 676 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 GRM3Q14832 879 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 ZIK1Q3SY52 487 aaPredicted RBP18.69■□□□□ 0.58
HOXC6-202ENST00000394331 CTRB2Q6GPI1 263 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms