RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 LHCGRP22888 699 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 SERPINA4P29622 427 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 SNRPD1P62314 119 aaKnown RBP14.91□□□□□ -0.02
GPC3-202ENST00000394299 PTSQ03393 145 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 ART3Q13508 389 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 AARS2Q5JTZ9 985 aaKnown RBP14.91□□□□□ -0.02
GPC3-202ENST00000394299 LRRC66Q68CR7 880 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 LAYNQ6UX15 382 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 SYVN1Q86TM6 617 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 ADGRG2Q8IZP9 1017 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 GRIN3AQ8TCU5 1115 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 IRF7Q92985 503 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 LRRC3BQ96PB8 259 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 CLPBQ9H078 707 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 SUV39H2Q9H5I1 410 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 WDR41Q9HAD4 459 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 CD84Q9UIB8 345 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 DHRS7Q9Y394 339 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 NOTCH4Q99466 2003 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 CARNS1A5YM72 827 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 CAPN8A6NHC0 703 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 GRXCR1A8MXD5 290 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 FGF4P08620 206 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 XRCC1P18887 633 aaPredicted RBP14.91□□□□□ -0.02
GPC3-202ENST00000394299 CSNK1DP48730 415 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 MS4A2Q01362 244 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 PPIGQ13427 754 aaKnown RBP eCLIP14.91□□□□□ -0.023e-23■□□□□ 9
GPC3-202ENST00000394299 TGFBIQ15582 683 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 SNX20Q7Z614 316 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 HGH1Q9BTY7 390 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 TMEM106CQ9BVX2 250 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 EFCAB1Q9HAE3 211 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 S100A14Q9HCY8 104 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 PCTPQ9UKL6 214 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 ADAMTS6Q9UKP5 1117 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 GUCA1CO95843 209 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 RPS17P08708 135 aaKnown RBP14.9□□□□□ -0.02
GPC3-202ENST00000394299 PABPC1P11940 636 aaKnown RBP14.9□□□□□ -0.02
GPC3-202ENST00000394299 VHLP40337 213 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 ADARP55265 1226 aaKnown RBP14.9□□□□□ -0.02
GPC3-202ENST00000394299 LCP2Q13094 533 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 KANK2Q63ZY3 851 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 ADIPOR2Q86V24 386 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 FUNDC1Q8IVP5 155 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 ZNF366Q8N895 744 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 OR52B6Q8NGF0 335 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 NAF1Q96HR8 494 aaKnown RBP14.9□□□□□ -0.02
GPC3-202ENST00000394299 SPHK2Q9NRA0 654 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 CRLS1Q9UJA2 301 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 HS3ST2Q9Y278 367 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 GBF1Q92538 1859 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 LINC01553A4QN01 128 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 SYCE1LA8MT33 242 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 NVLO15381 856 aaKnown RBP14.9□□□□□ -0.02
GPC3-202ENST00000394299 SOCS5O75159 536 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 ZNF7P17097 686 aaPredicted RBP14.9□□□□□ -0.02
GPC3-202ENST00000394299 ACRV1P26436 265 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 ADSLP30566 484 aaPredicted RBP14.9□□□□□ -0.02
GPC3-202ENST00000394299 CREB5Q02930 508 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 PTK2BQ14289 1009 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 RBBP7Q16576 425 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 LRRC36Q1X8D7 754 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 ZNF423Q2M1K9 1284 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 MUM1Q2TAK8 710 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 POM121L1PQ3SYA9 428 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 C12orf76Q8N812 135 aaPredicted RBP14.9□□□□□ -0.02
GPC3-202ENST00000394299 STON2Q8WXE9 905 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 DNAJC9Q8WXX5 260 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 HBEGFQ99075 208 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 PRKAG2Q9UGJ0 569 aa14.9□□□□□ -0.02
GPC3-202ENST00000394299 E2F3O00716 465 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 SLC22A2O15244 555 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 KLK8O60259 260 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 SNX2O60749 519 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 ITGALP20701 1170 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 EPHA5P54756 1037 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 RPL26P61254 145 aaKnown RBP14.89□□□□□ -0.03
GPC3-202ENST00000394299 AP2B1P63010 937 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 ILF2Q12905 390 aaKnown RBP14.89□□□□□ -0.03
GPC3-202ENST00000394299 SQLEQ14534 574 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 CARD16Q5EG05 197 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 SBSNQ6UWP8 590 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 C16orf89Q6UX73 402 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 BNC2Q6ZN30 1099 aaPredicted RBP14.89□□□□□ -0.03
GPC3-202ENST00000394299 PHYKPLQ8IUZ5 450 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 STK40Q8N2I9 435 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 SP7Q8TDD2 431 aaPredicted RBP14.89□□□□□ -0.03
GPC3-202ENST00000394299 DLG3Q92796 817 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 TUBGCP3Q96CW5 907 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 ASIC4Q96FT7 647 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 SCRN2Q96FV2 425 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 LRCH3Q96II8 777 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 KLHL32Q96NJ5 620 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 SLC39A3Q9BRY0 314 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 GMPR2Q9P2T1 348 aaKnown RBP14.89□□□□□ -0.03
GPC3-202ENST00000394299 POLG2Q9UHN1 485 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 TTC34A8MYJ7 566 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 OR4F21O95013 312 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 HSPA8P11142 646 aaKnown RBP14.89□□□□□ -0.03
GPC3-202ENST00000394299 CEBPBP17676 345 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms