RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 PCDH18Q9HCL0 1135 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 COMMD3-BMI1R4GMX3 469 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 KLRG2A4D1S0 409 aaPredicted RBP13.31□□□□□ -0.28
GSE1-202ENST00000393243 UGT2B11O75310 529 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 CLPXO76031 633 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 CD48P09326 243 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 MASP1P48740 699 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 KLF10Q13118 480 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 ACAP2Q15057 778 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 FIBCD1Q8N539 461 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 FBXO15Q8NCQ5 510 aaPredicted RBP13.31□□□□□ -0.28
GSE1-202ENST00000393243 OR14C36Q8NHC7 312 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 MSRAQ9UJ68 235 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 MADDQ8WXG6 1647 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 PRAMEF33A0A0G2JMD5 474 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 RGS10O43665 173 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 PRAMEF10O60809 474 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 ATF4P18848 351 aaPredicted RBP13.31□□□□□ -0.28
GSE1-202ENST00000393243 PRKCHP24723 683 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 DLG1Q12959 904 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 PAOXQ6QHF9 649 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 UNC93AQ86WB7 457 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 PHYKPLQ8IUZ5 450 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 TRPV1Q8NER1 839 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 MED28Q9H204 178 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 KCNN2Q9H2S1 579 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 GPN1Q9HCN4 374 aaPredicted RBP13.31□□□□□ -0.28
GSE1-202ENST00000393243 INTS10Q9NVR2 710 aaKnown RBP13.31□□□□□ -0.28
GSE1-202ENST00000393243 REREQ9P2R6 1566 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 GLYATL1P3A0A0U1RQE8 302 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 SLC9A3R1O14745 358 aaPredicted RBP13.31□□□□□ -0.28
GSE1-202ENST00000393243 STATHP02808 62 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 PRH1P02810 166 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 BMP6P22004 513 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 RPL3P39023 403 aaKnown RBP13.31□□□□□ -0.28
GSE1-202ENST00000393243 ZNF135P52742 658 aaPredicted RBP13.31□□□□□ -0.28
GSE1-202ENST00000393243 ZNF280BQ86YH2 543 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 PLEKHA1Q9HB21 404 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 NR2E3Q9Y5X4 410 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 USP31Q70CQ4 1352 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 A0A0G2JN53 185 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 C1RP00736 705 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 CORO1AP31146 461 aaKnown RBP13.31□□□□□ -0.28
GSE1-202ENST00000393243 CDH12P55289 794 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 IDNKQ5T6J7 187 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 TMPRSS11AQ6ZMR5 421 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 WDR12Q9GZL7 423 aaKnown RBP13.31□□□□□ -0.28
GSE1-202ENST00000393243 RMI1Q9H9A7 625 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 IFT46Q9NQC8 304 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 DNAJC11Q9NVH1 559 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 MARK1Q9P0L2 795 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 SAMD4AQ9UPU9 718 aaKnown RBP13.31□□□□□ -0.28
GSE1-202ENST00000393243 MED31Q9Y3C7 131 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 NCANO14594 1321 aa13.31□□□□□ -0.28
GSE1-202ENST00000393243 OR1F1O43749 312 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 C2P06681 752 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 FAUP35544 74 aaKnown RBP13.3□□□□□ -0.28
GSE1-202ENST00000393243 DDR1Q08345 913 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 TAF10Q12962 218 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 GANABQ14697 944 aaKnown RBP13.3□□□□□ -0.28
GSE1-202ENST00000393243 BEND5Q7L4P6 421 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 LINGO2Q7L985 606 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 TMPRSS9Q7Z410 1059 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 SIDT2Q8NBJ9 832 aaKnown RBP13.3□□□□□ -0.28
GSE1-202ENST00000393243 OR10H4Q8NGA5 316 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 YIPF4Q9BSR8 244 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 CHD1O14646 1710 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 ITSN1Q15811 1721 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 H3BM21 787 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 GTF2BQ00403 316 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 NIPA1Q7RTP0 329 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 ZNF398Q8TD17 642 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 DUSP16Q9BY84 665 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 SORCS3Q9UPU3 1222 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 MEIS2O14770 477 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 SNX4O95219 450 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 ALOX5P09917 674 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 CHAF1BQ13112 559 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 TLR1Q15399 786 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 CA9Q16790 459 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 GCNT6Q5T4J0 391 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 ZZZ3Q8IYH5 903 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 ZFP3Q96NJ6 502 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 SNX7Q9UNH6 387 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 C9IYK1 514 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 RPLP2P05387 115 aaKnown RBP13.3□□□□□ -0.28
GSE1-202ENST00000393243 THRBP10828 461 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 MAZP56270 477 aaKnown RBP13.3□□□□□ -0.28
GSE1-202ENST00000393243 GJA9P57773 515 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 RALGPS1Q5JS13 557 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 C9orf57Q5W0N0 161 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 CAPN13Q6MZZ7 669 aaPredicted RBP13.3□□□□□ -0.28
GSE1-202ENST00000393243 OR10A6Q8NH74 314 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 CLP1Q92989 425 aaKnown RBP13.3□□□□□ -0.28
GSE1-202ENST00000393243 RAI2Q9Y5P3 530 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 KAT6AQ92794 2004 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 TTC24A2A3L6 582 aaPredicted RBP13.3□□□□□ -0.28
GSE1-202ENST00000393243 VLDLRP98155 873 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 ZBTB2Q8N680 514 aa13.3□□□□□ -0.28
GSE1-202ENST00000393243 OR2T34Q8NGX1 318 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms