RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 BEGAINQ9BUH8 593 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 CIPCQ9C0C6 399 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 C11orf49Q9H6J7 331 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 C6orf203Q9P0P8 240 aaPredicted RBP25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 E2F3O00716 465 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 TRIM24O15164 1050 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 BPIP17213 487 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 RPS3P23396 243 aaKnown RBP eCLIP25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 ZFP1Q6P2D0 407 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 HACD2Q6Y1H2 254 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 OR56A4Q8NGH8 313 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 LMLNQ96KR4 655 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 NUSAP1Q9BXS6 441 aaKnown RBP25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 SPAG4Q9NPE6 437 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 ZDHHC7Q9NXF8 308 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 NUDT4Q9NZJ9 180 aa25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 SUCOQ9UBS9 1254 aaKnown RBP25.32■■□□□ 1.64
SMARCD3-203ENST00000392811 GOLGA8CPA6NN73 597 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 A8MX80 341 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 NR5A2O00482 541 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 CCL16O15467 120 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 VPS4BO75351 444 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 ADH1AP07327 375 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 SRCP12931 536 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 ITGALP20701 1170 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 SERPINA4P29622 427 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 PITRM1Q5JRX3 1037 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 C8orf82Q6P1X6 216 aaPredicted RBP25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 RBFAQ8N0V3 343 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 VOPP1Q96AW1 172 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 ASB9Q96DX5 294 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 C19orf43Q9BQ61 176 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 MRPL40Q9NQ50 206 aaKnown RBP25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 ASAH2Q9NR71 780 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 APPL1Q9UKG1 709 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 CROTQ9UKG9 612 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 PRSS21Q9Y6M0 314 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 ANKRD12Q6UB98 2062 aa25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 ZNF106Q9H2Y7 1883 aaKnown RBP25.31■■□□□ 1.64
SMARCD3-203ENST00000392811 A6NHS1 94 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 KIAA0355O15063 1070 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 BAIAP3O94812 1187 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 CYBBP04839 570 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 UROSP10746 265 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 ITGB6P18564 788 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 UGT1A6P19224 532 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 UGT1A1P22309 533 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 UGT1A4P22310 534 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 UGT1A3P35503 534 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 UGT1A5P35504 534 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 CCR2P41597 374 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 RETREG3Q86VR2 466 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 PLCD3Q8N3E9 789 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 TMEM199Q8N511 208 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 LKAAEAR1Q8TD35 194 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 DLG3Q92796 817 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 KLHL32Q96NJ5 620 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 C17orf80Q9BSJ5 609 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 EBF3Q9H4W6 596 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 HCFC1R1Q9NWW0 138 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 GNPTGQ9UJJ9 305 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 CCL26Q9Y258 94 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 TRBV5-4A0A0C4DH59 114 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 GLYATL1P3A0A0U1RQE8 302 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 CSPG5O95196 566 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 RALGDSQ12967 914 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 TRIM25Q14258 630 aaKnown RBP25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 OGFRL1Q5TC84 451 aaPredicted RBP25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 TMEM154Q6P9G4 183 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 GPRIN3Q6ZVF9 776 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 TSPAN33Q86UF1 283 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 CLDN19Q8N6F1 224 aa25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 SDR39U1Q9NRG7 319 aaPredicted RBP25.3■■□□□ 1.64
SMARCD3-203ENST00000392811 PRORSD1PA6NEY8 169 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 BBIP1A8MTZ0 92 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 PRR35P0CG20 571 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 ACRV1P26436 265 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 HLA-FP30511 346 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 AQP4P55087 323 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 CHRNA6Q15825 494 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 GSTA3Q16772 222 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 SBSNQ6UWP8 590 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 FRA10AC1Q70Z53 315 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 EFL1Q7Z2Z2 1120 aaKnown RBP25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 GATA6Q92908 595 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 PPP2R3CQ969Q6 453 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 PCDHAC1Q9H158 963 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 TMEM181Q9P2C4 612 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 MKI67P46013 3256 aaKnown RBP25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 NPIPB15A6NHN6 443 aaPredicted RBP25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 PEX1O43933 1283 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 CHEK2O96017 543 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 SNRPD1P62314 119 aaKnown RBP25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 SEMG2Q02383 582 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 XKR7Q5GH72 579 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 OGFOD2Q6N063 350 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 ADAMTSL2Q86TH1 951 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 SPATA24Q86W54 205 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 ROPN1LQ96C74 230 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 ZNF382Q96SR6 550 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms