RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ITGB7P26010 798 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 RASSF2P50749 326 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 DLX2Q07687 328 aaPredicted RBP11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 CRY1Q16526 586 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 UNC50Q53HI1 259 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 VWA5B1Q5TIE3 1220 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 NAIF1Q69YI7 327 aaPredicted RBP11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 SFTPA1Q8IWL2 248 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 RAVER1Q8IY67 606 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 MICALL1Q8N3F8 863 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 CLDN19Q8N6F1 224 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 AGR3Q8TD06 166 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 MAPK15Q8TD08 544 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 FGF14Q92915 247 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 EXT2Q93063 718 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 CHFRQ96EP1 664 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 PTCD3Q96EY7 689 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 ASB2Q96Q27 587 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 CCDC106Q9BWC9 280 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 FAM83DQ9H4H8 585 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 ARHGEF3Q9NR81 526 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 SARDHQ9UL12 918 aa11.32□□□□□ -0.6
SMARCAL1-203ENST00000392128 SUPT3HB4E1H0 165 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 PSMD11O00231 422 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 KPNA3O00505 521 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 SUPT3HO75486 399 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 KAT7O95251 611 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 SLC25A14O95258 325 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 HNRNPLP14866 589 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 MTHFRP42898 656 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 ALDH18A1P54886 795 aaKnown RBP11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 NAA20P61599 178 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 PFKFB4Q16877 469 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 SLC9B1Q4ZJI4 515 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 COL13A1Q5TAT6 717 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 METTL21CQ5VZV1 264 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 SERPINA13PQ6UXR4 307 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 C10orf67Q8IYJ2 551 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 LKAAEAR1Q8TD35 194 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 NSL1Q96IY1 281 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 FAR2Q96K12 515 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 SPATA16Q9BXB7 569 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 ZNF576Q9H609 170 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 ARL8BQ9NVJ2 186 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 ARMCX1Q9P291 453 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 KLHL42Q9P2K6 505 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 THAP10Q9P2Z0 257 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 CD84Q9UIB8 345 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 TMPRSS11EQ9UL52 423 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 H0Y858 1186 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 STX16-NPEPL1H3BU86 382 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 ARNTLO00327 626 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 STX16O14662 325 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 SUPT7LO94864 414 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 GFAPP14136 432 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 CALB2P22676 271 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 GDI1P31150 447 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 GRIA2P42262 883 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 RGS4P49798 205 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 B4GALNT1Q00973 533 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 ITPRIPL2Q3MIP1 535 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 SH2D4BQ5SQS7 431 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 GPRC6AQ5T6X5 926 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 HENMT1Q5T8I9 393 aaKnown RBP11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 TECPR1Q7Z6L1 1165 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 CUZD1Q86UP6 607 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 FBXO39Q8N4B4 442 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 TRAM1L1Q8N609 369 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 ZBTB2Q8N680 514 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 PIP4K2CQ8TBX8 421 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 SLC7A6OSQ96CW6 309 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 PANX3Q96QZ0 392 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 ZSCAN5AQ9BUG6 496 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 TRMT61BQ9BVS5 477 aaKnown RBP11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 C1QTNF3Q9BXJ4 246 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 SHCBP1LQ9BZQ2 653 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 SPATS2LQ9NUQ6 558 aaKnown RBP11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 LRRK1Q38SD2 2015 aa11.31□□□□□ -0.6
SMARCAL1-203ENST00000392128 EYSQ5T1H1 3165 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 MAGEC1O60732 1142 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 TRIM16O95361 564 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 DGKAP23743 735 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 ETV3P41162 512 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 POM121L1PQ3SYA9 428 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 TXNDC11Q6PKC3 985 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 LIPIQ6XZB0 460 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 Q6ZVL8 140 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 ADAMTSL2Q86TH1 951 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 NRSN1Q8IZ57 195 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 AFAP1L2Q8N4X5 818 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 SUSD6Q92537 303 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 PPP1R16AQ96I34 528 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 FAM129BQ96TA1 746 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 TCF7L2Q9NQB0 619 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 HCN2Q9UL51 889 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 TRIM33Q9UPN9 1127 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 TRPC5OSA6NMA1 111 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 SPINT1O43278 529 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 ELFN1P0C7U0 828 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 NQO1P15559 274 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms