RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 SNX1Q13596 522 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 MAP9Q49MG5 647 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 GPR33Q49SQ1 333 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 IYDQ6PHW0 289 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 WASH2PQ6VEQ5 465 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 PPP1R21Q6ZMI0 780 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 SNX20Q7Z614 316 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 SFTPA2Q8IWL1 248 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 REXO1L1PQ8IX06 675 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 RASGEF1CQ8N431 466 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 DNAAF3Q8N9W5 541 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 OR13C4Q8NGS5 318 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 STYXQ8WUJ0 223 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 PATE1Q8WXA2 126 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 OSGEPL1Q9H4B0 414 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 EPB41L1Q9H4G0 881 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 ETNK1Q9HBU6 452 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 WASH6PQ9NQA3 447 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 EIF2B3Q9NR50 452 aaKnown RBP12.49□□□□□ -0.41
GGPS1-203ENST00000391855 RAB6BQ9NRW1 208 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 KLC4Q9NSK0 619 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 TBC1D29Q9UFV1 150 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 CRLS1Q9UJA2 301 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 RIMKLBQ9ULI2 386 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 TTC7AQ9ULT0 858 aaPredicted RBP12.49□□□□□ -0.41
GGPS1-203ENST00000391855 SLC30A1Q9Y6M5 507 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 CHD8Q9HCK8 2581 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 RP1P56715 2156 aa12.49□□□□□ -0.41
GGPS1-203ENST00000391855 MAP1BP46821 2468 aaKnown RBP12.48□□□□□ -0.41
GGPS1-203ENST00000391855 PRR19A6NJB7 356 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 SRRM3A6NNA2 597 aaPredicted RBP12.48□□□□□ -0.41
GGPS1-203ENST00000391855 BRINP1O60477 761 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 UGT1A9O60656 530 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 UGT1A6P19224 532 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 IDSP22304 550 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 UGT1A1P22309 533 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 UGT1A4P22310 534 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 UGT1A3P35503 534 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 UGT1A5P35504 534 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 PDX1P52945 283 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 EPHA4P54764 986 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 ERVPABLB-1P60509 514 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 XIAPP98170 497 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 HHEXQ03014 270 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 SQSTM1Q13501 440 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 POU6F1Q14863 301 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 SKIDA1Q1XH10 827 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 KHDC1Q4VXA5 237 aaKnown RBP12.48□□□□□ -0.41
GGPS1-203ENST00000391855 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.48□□□□□ -0.41
GGPS1-203ENST00000391855 ZNF648Q5T619 568 aaPredicted RBP12.48□□□□□ -0.41
GGPS1-203ENST00000391855 AGAP9Q5VTM2 703 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 NLRP9Q7RTR0 991 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 GSTA5Q7RTV2 222 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 PIM3Q86V86 326 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 ZNF547Q8IVP9 402 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 Q8N9G6 341 aaPredicted RBP12.48□□□□□ -0.41
GGPS1-203ENST00000391855 SNIP1Q8TAD8 396 aaKnown RBP12.48□□□□□ -0.41
GGPS1-203ENST00000391855 DCUN1D1Q96GG9 259 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 ATXN7L3BQ96GX2 97 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 ZNF578Q96N58 590 aaPredicted RBP12.48□□□□□ -0.41
GGPS1-203ENST00000391855 RANBP9Q96S59 729 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 SLC38A3Q99624 504 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 KCNF1Q9H3M0 494 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 UGT1A7Q9HAW7 530 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 UGT1A10Q9HAW8 530 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 UGT1A8Q9HAW9 530 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 THSD1Q9NS62 852 aa12.48□□□□□ -0.41
GGPS1-203ENST00000391855 NLE1Q9NVX2 485 aaPredicted RBP12.48□□□□□ -0.41
GGPS1-203ENST00000391855 HEATR9A2RTY3 570 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 LILRA5A6NI73 299 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 PDZK1P1A8MUH7 402 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 PGRMC1O00264 195 aaKnown RBP12.47□□□□□ -0.41
GGPS1-203ENST00000391855 CES2O00748 559 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 DUX1O43812 170 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 SNX2O60749 519 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 PSMA3P25788 255 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 RBMS1P29558 406 aaKnown RBP12.47□□□□□ -0.41
GGPS1-203ENST00000391855 ALDH4A1P30038 563 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 MC4RP32245 332 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 CXCR5P32302 372 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 RPL22P35268 128 aaKnown RBP12.47□□□□□ -0.41
GGPS1-203ENST00000391855 HALP42357 657 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 TRA2AQ13595 282 aaKnown RBP eCLIP12.47□□□□□ -0.41
GGPS1-203ENST00000391855 SEPT6Q14141 434 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 PTPRCAPQ14761 206 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 TBC1D25Q3MII6 688 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 PLA2G4EQ3MJ16 856 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 BCL7AQ4VC05 210 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 C3orf38Q5JPI3 329 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 ABRAXAS1Q6UWZ7 409 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 C11orf96Q7Z7L8 435 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 AMZ2Q86W34 360 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 RBM12BQ8IXT5 1001 aaKnown RBP12.47□□□□□ -0.41
GGPS1-203ENST00000391855 NXPE1Q8N323 547 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 SLC35F6Q8N357 371 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 TAB3Q8N5C8 712 aaPredicted RBP12.47□□□□□ -0.41
GGPS1-203ENST00000391855 RASGEF1AQ8N9B8 481 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 OR52K1Q8NGK4 314 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 OR10G6Q8NH81 332 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 PEX13Q92968 403 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms