RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 VASH2Q86V25 355 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 ZNF761Q86XN6 746 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-202ENST00000381208 CCDC170Q8IYT3 715 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 RCOR2Q8IZ40 523 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 CACNA2D3Q8IZS8 1091 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 BMPERQ8N8U9 685 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 KIAA1143Q96AT1 154 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-202ENST00000381208 RBM41Q96IZ5 413 aaKnown RBP12.81□□□□□ -0.36
RPAIN-202ENST00000381208 TTC25Q96NG3 672 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 CEP41Q9BYV8 373 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 OSGEPL1Q9H4B0 414 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 POT1Q9NUX5 634 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 TRHDEQ9UKU6 1024 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 PCYT1BQ9Y5K3 369 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-202ENST00000381208 HEMK1Q9Y5R4 338 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-202ENST00000381208 ALG6Q9Y672 507 aa12.81□□□□□ -0.36
RPAIN-202ENST00000381208 ZFC3H1O60293 1989 aaKnown RBP12.8□□□□□ -0.36
RPAIN-202ENST00000381208 TLN1Q9Y490 2541 aaKnown RBP12.8□□□□□ -0.36
RPAIN-202ENST00000381208 LOC285095A0A1B0GVY8 99 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 RAD1O60671 282 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 PMPCBO75439 489 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 ZNF189O75820 626 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-202ENST00000381208 MT-CYBP00156 380 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-202ENST00000381208 SLC4A1P02730 911 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 TNNT1P13805 278 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 BPIP17213 487 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 HLA-DPA1P20036 260 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 IDSP22304 550 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 MPSTP25325 297 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 TBX2Q13207 712 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-202ENST00000381208 MPP3Q13368 585 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 AGAP9Q5VTM2 703 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 ABRAXAS1Q6UWZ7 409 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 SPOCD1Q6ZMY3 1216 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 TMEM26Q6ZUK4 368 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 KATNAL2Q8IYT4 538 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 NLGN4XQ8N0W4 816 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 NLGN4YQ8NFZ3 816 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-202ENST00000381208 SPATA22Q8NHS9 363 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 EXTL1Q92935 676 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 KCTD12Q96CX2 325 aaKnown RBP12.8□□□□□ -0.36
RPAIN-202ENST00000381208 RTP4Q96DX8 246 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 FCRL5Q96RD9 977 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 FAM117AQ9C073 453 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 ADNPQ9H2P0 1102 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 PRDM8Q9NQV8 689 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 OCIAD1Q9NX40 245 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 TMEM9Q9P0T7 183 aa12.8□□□□□ -0.36
RPAIN-202ENST00000381208 KLHL8Q9P2G9 620 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-202ENST00000381208 MN1Q10571 1320 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-202ENST00000381208 KLHL33A6NCF5 533 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 ZNF891A8MT65 544 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-202ENST00000381208 PDZK1P1A8MUH7 402 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 UBXN7O94888 489 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 LCA5LO95447 670 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 C9P02748 559 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 PIRTP0C851 137 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 AMD1P17707 334 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 DEKP35659 375 aaKnown RBP12.79□□□□□ -0.36
RPAIN-202ENST00000381208 CYLC1P35663 651 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-202ENST00000381208 HALP42357 657 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 MAPK9P45984 424 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 WNT3AP56704 352 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 MC1RQ01726 317 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 WASHC5Q12768 1159 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 XRCC4Q13426 336 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 ITGA9Q13797 1035 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 SPA17Q15506 151 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 PPP2R5EQ16537 467 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 TBR1Q16650 682 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 LINC00303Q3SY05 128 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 SNAP47Q5SQN1 464 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 LDLRAP1Q5SW96 308 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 KAZNQ674X7 775 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 ANKS6Q68DC2 871 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 C11orf63Q6NUN7 778 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 SARM1Q6SZW1 724 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 CRTC3Q6UUV7 619 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 PID1Q7Z2X4 250 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 HTR3CQ8WXA8 447 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 SLC45A3Q96JT2 553 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 ZNF514Q96K75 400 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-202ENST00000381208 PPP1R2P1Q96PQ5 205 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 SLC12A9Q9BXP2 914 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 STARD5Q9NSY2 213 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 PILRAQ9UKJ1 303 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 PKP3Q9Y446 797 aa12.79□□□□□ -0.36
RPAIN-202ENST00000381208 TMEM184BQ9Y519 407 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-202ENST00000381208 DNMT3AQ9Y6K1 912 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-202ENST00000381208 hCG_1818297A0A087WSY0 165 aa12.78□□□□□ -0.36
RPAIN-202ENST00000381208 PRR19A6NJB7 356 aa12.78□□□□□ -0.36
RPAIN-202ENST00000381208 A8MU76 341 aa12.78□□□□□ -0.36
RPAIN-202ENST00000381208 POLR1CO15160 346 aaPredicted RBP12.78□□□□□ -0.36
RPAIN-202ENST00000381208 SPAM1P38567 509 aa12.78□□□□□ -0.36
RPAIN-202ENST00000381208 SLC19A1P41440 591 aa12.78□□□□□ -0.36
RPAIN-202ENST00000381208 ARSDP51689 593 aa12.78□□□□□ -0.36
RPAIN-202ENST00000381208 COPS2P61201 443 aa12.78□□□□□ -0.36
RPAIN-202ENST00000381208 ABHD18Q0P651 414 aa12.78□□□□□ -0.36
RPAIN-202ENST00000381208 TMEM115Q12893 351 aaPredicted RBP12.78□□□□□ -0.36
RPAIN-202ENST00000381208 SRSF6Q13247 344 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms