RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 RALGPS2Q86X27 583 aaPredicted RBP16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 OR2T11Q8NH01 316 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 HMX1Q9NP08 348 aaPredicted RBP16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 MARCH5Q9NX47 278 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 CHCHD3Q9NX63 227 aaKnown RBP16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 ZNF225Q9UK10 706 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 F5H5T6 163 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 CRCPO75575 148 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 RPLP2P05387 115 aaKnown RBP16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 FGF4P08620 206 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 TACR2P21452 398 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 NUP107P57740 925 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 BNIP3Q12983 259 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 FAM26DQ5JW98 314 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 SPRED1Q7Z699 444 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 UMODL1-AS1Q8N2C9 162 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 PACRGLQ8N7B6 248 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 TNIP2Q8NFZ5 429 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 BCL7CQ8WUZ0 217 aaPredicted RBP16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 CAPNS2Q96L46 248 aa16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 ZFP37Q9Y6Q3 630 aaPredicted RBP16.12■□□□□ 0.17
NKX3-1-201ENST00000380871 PAPSS2O95340 614 aaPredicted RBP16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 PCNAP12004 261 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 SELPP16109 830 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 FMO4P31512 558 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 CDKN1CP49918 316 aaPredicted RBP16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 BNIP2Q12982 314 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 SCML4Q8N228 414 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 NAT16Q8N8M0 369 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 ITFG2Q969R8 447 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 FUBP3Q96I24 572 aaKnown RBP eCLIP16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 CDK15Q96Q40 435 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 SEZ6LQ9BYH1 1024 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 PAIP1Q9H074 479 aaKnown RBP16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 HIPK3Q9H422 1215 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 BPIFA1Q9NP55 256 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 PRDM5Q9NQX1 630 aaPredicted RBP16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 SMPD3Q9NY59 655 aaPredicted RBP16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 MED16Q9Y2X0 877 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 C1RP00736 705 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 HRH2P25021 359 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 IL12AP29459 219 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 SLC6A4P31645 630 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 RPS9P46781 194 aaKnown RBP16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 NAA20P61599 178 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 SETMARQ53H47 684 aaPredicted RBP16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 DHRSXQ8N5I4 330 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 TANKQ92844 425 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 GID8Q9NWU2 228 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 RNF112Q9ULX5 631 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 ZNF510Q9Y2H8 683 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 SH3PXD2BA1X283 911 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 NPEPPSL1A6NEC2 478 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 ALDH1A1P00352 501 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 CYBBP04839 570 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 OR4D2P58180 307 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 HTRA3P83110 453 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 ABRAXAS1Q6UWZ7 409 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 RAB44Q7Z6P3 723 aaPredicted RBP16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 SYVN1Q86TM6 617 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 ZNF683Q8IZ20 524 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 THAP11Q96EK4 314 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 PLGRKTQ9HBL7 147 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 GPBP1L1Q9HC44 474 aaPredicted RBP16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 TMEM248Q9NWD8 314 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 ZNF711Q9Y462 761 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 PCDHGC4Q9Y5F7 938 aa16.11■□□□□ 0.17
NKX3-1-201ENST00000380871 TRIM64A6NGJ6 449 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 ECI2O75521 394 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 MATN4O95460 622 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 CST5P28325 142 aaPredicted RBP16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 CAPGP40121 348 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 RGRP47804 291 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 TMTC4Q5T4D3 741 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 PRMT9Q6P2P2 845 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 SLC2A7Q6PXP3 512 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 TRIM74Q86UV6 250 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 TRIM73Q86UV7 250 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 FBXO39Q8N4B4 442 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 GIPC3Q8TF64 312 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 AUTS2Q8WXX7 1259 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 C1orf74Q96LT6 269 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 RNF145Q96MT1 663 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 PPP1R2P1Q96PQ5 205 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 TUBA8Q9NY65 449 aaPredicted RBP16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 MYO16Q9Y6X6 1858 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 A0A1W2PP18 115 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 SLC38A8A6NNN8 435 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 VNN2O95498 520 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 GALTP07902 379 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 IDO1P14902 403 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 ZNF182P17025 639 aaPredicted RBP16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 MATN1P21941 496 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 KCNK10P57789 538 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 LCP2Q13094 533 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 RCAN2Q14206 197 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 IRAK1BP1Q5VVH5 260 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 OGFOD2Q6N063 350 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 BEND5Q7L4P6 421 aa16.1■□□□□ 0.17
NKX3-1-201ENST00000380871 ITIH5Q86UX2 942 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms