RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 MTCL1Q9Y4B5 1905 aaKnown RBP22.86■■□□□ 1.25
VPS16-201ENST00000380443 ZNF106Q9H2Y7 1883 aaKnown RBP22.86■■□□□ 1.25
VPS16-201ENST00000380443 AGAP14A8MT82 685 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 GJA1P17302 382 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 TSPAN8P19075 237 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 DGKAP23743 735 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 ACRV1P26436 265 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 ERVFC1P60507 584 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 PTPRRQ15256 657 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 PCBP2Q15366 365 aaKnown RBP eCLIP22.86■■□□□ 1.252e-9■■■■□ 21.4
VPS16-201ENST00000380443 PPP1R3AQ16821 1122 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 CARD16Q5EG05 197 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 OGFOD2Q6N063 350 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 FAM151BQ6UXP7 276 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 OR6K2Q8NGY2 324 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 PHOSPHO2Q8TCD6 241 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 TSPEARQ8WU66 669 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 SLC22A17Q8WUG5 538 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 DLG3Q92796 817 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 CCDC124Q96CT7 223 aaKnown RBP22.86■■□□□ 1.25
VPS16-201ENST00000380443 TNKS2Q9H2K2 1166 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 HECAQ9UBI9 543 aaPredicted RBP22.86■■□□□ 1.25
VPS16-201ENST00000380443 FNDC3AQ9Y2H6 1198 aaKnown RBP22.86■■□□□ 1.25
VPS16-201ENST00000380443 LRCH1Q9Y2L9 728 aa22.86■■□□□ 1.25
VPS16-201ENST00000380443 PIP5K1BO14986 540 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 CLDN7O95471 211 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 BAG2O95816 211 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 S100BP04271 92 aaPredicted RBP22.85■■□□□ 1.25
VPS16-201ENST00000380443 HNRNPA1P09651 372 aaKnown RBP eCLIP22.85■■□□□ 1.25
VPS16-201ENST00000380443 BPIP17213 487 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 HLA-FP30511 346 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 TCHHL1Q5QJ38 904 aaPredicted RBP22.85■■□□□ 1.25
VPS16-201ENST00000380443 METTL2BQ6P1Q9 378 aaKnown RBP22.85■■□□□ 1.25
VPS16-201ENST00000380443 GK5Q6ZS86 529 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 DHDDSQ86SQ9 333 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 NSUN5Q96P11 429 aaKnown RBP22.85■■□□□ 1.25
VPS16-201ENST00000380443 MCCC1Q96RQ3 725 aaPredicted RBP22.85■■□□□ 1.25
VPS16-201ENST00000380443 ZNF382Q96SR6 550 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 ZNF184Q99676 751 aaPredicted RBP22.85■■□□□ 1.25
VPS16-201ENST00000380443 HGH1Q9BTY7 390 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 TDP1Q9NUW8 608 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 CRLS1Q9UJA2 301 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 TRIM38O00635 465 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 NRP2O60462 931 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 MATN4O95460 622 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 PSME3P61289 254 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 LRP8Q14114 963 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 TGFBIQ15582 683 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 MYO1HQ8N1T3 1032 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 PCYOX1LQ8NBM8 494 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 HMGCLL1Q8TB92 370 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 ROPN1LQ96C74 230 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 C3orf30Q96M34 536 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 SLC2A11Q9BYW1 496 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 CACNA2D2Q9NY47 1150 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 PPM1HQ9ULR3 514 aa22.85■■□□□ 1.25
VPS16-201ENST00000380443 LRRC14BA6NHZ5 514 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 RAD51BO15315 384 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 IDO1P14902 403 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 CD1EP15812 388 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 GPX3P22352 226 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 CCR2P41597 374 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 POLR2LP62875 67 aaKnown RBP22.84■■□□□ 1.25
VPS16-201ENST00000380443 FUT11Q495W5 492 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 REP15Q6BDI9 236 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 ELMSAN1Q6PJG2 1045 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 FRA10AC1Q70Z53 315 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 TMEM126BQ8IUX1 230 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 PHYKPLQ8IUZ5 450 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 DDIASQ8IXT1 998 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 MIER2Q8N344 545 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 IRF7Q92985 503 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 ULK4Q96C45 1275 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 NPAS2Q99743 824 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 CIPCQ9C0C6 399 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 SARS2Q9NP81 518 aaKnown RBP22.84■■□□□ 1.25
VPS16-201ENST00000380443 SEMA4BQ9NPR2 832 aaPredicted RBP22.84■■□□□ 1.25
VPS16-201ENST00000380443 TLR9Q9NR96 1032 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 SLC4A7Q9Y6M7 1214 aa22.84■■□□□ 1.25
VPS16-201ENST00000380443 WASH3PC4AMC7 463 aa22.83■■□□□ 1.25
VPS16-201ENST00000380443 CFLARO15519 480 aa22.83■■□□□ 1.25
VPS16-201ENST00000380443 XYLBO75191 536 aa22.83■■□□□ 1.25
VPS16-201ENST00000380443 PABPC1P11940 636 aaKnown RBP22.83■■□□□ 1.25
VPS16-201ENST00000380443 HK3P52790 923 aa22.83■■□□□ 1.25
VPS16-201ENST00000380443 LRIT3Q3SXY7 679 aa22.83■■□□□ 1.25
VPS16-201ENST00000380443 TTLL9Q3SXZ7 439 aa22.83■■□□□ 1.25
VPS16-201ENST00000380443 COQ5Q5HYK3 327 aa22.83■■□□□ 1.25
VPS16-201ENST00000380443 CRTC1Q6UUV9 634 aa22.83■■□□□ 1.25
VPS16-201ENST00000380443 GPRIN3Q6ZVF9 776 aa22.83■■□□□ 1.25
VPS16-201ENST00000380443 NXPE1Q8N323 547 aa22.83■■□□□ 1.25
VPS16-201ENST00000380443 KIAA1958Q8N8K9 716 aa22.83■■□□□ 1.25
VPS16-201ENST00000380443 N4BP2L2Q92802 583 aaPredicted RBP22.83■■□□□ 1.25
VPS16-201ENST00000380443 CCDC167Q9P0B6 97 aa22.83■■□□□ 1.25
VPS16-201ENST00000380443 C6orf203Q9P0P8 240 aaPredicted RBP22.83■■□□□ 1.25
VPS16-201ENST00000380443 NDUFAF1Q9Y375 327 aa22.83■■□□□ 1.25
VPS16-201ENST00000380443 EIF3FO00303 357 aaPredicted RBP22.82■■□□□ 1.24
VPS16-201ENST00000380443 POU2F2P09086 479 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 CBSLP0DN79 551 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 NFKBIAP25963 317 aa22.82■■□□□ 1.24
VPS16-201ENST00000380443 CTNNB1P35222 781 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms