RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 PIP4K2CQ8TBX8 421 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 OR8D1Q8WZ84 308 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 INPP5DQ92835 1189 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 PDLIM5Q96HC4 596 aaKnown RBP17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 ACOX2Q99424 681 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 FAM83DQ9H4H8 585 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 TNFRSF12AQ9NP84 129 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 THAP10Q9P2Z0 257 aaPredicted RBP17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 APOBEC2Q9Y235 224 aaKnown RBP17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 LRRC14BA6NHZ5 514 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 CAPN14A8MX76 684 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 SUPT3HB4E1H0 165 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 HDAC3O15379 428 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 SUPT3HO75486 399 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 SIX3O95343 332 aaPredicted RBP17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 TRIM16O95361 564 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 GM2AP17900 193 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 NFKBIAP25963 317 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 NSG1P42857 185 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 LIPIQ6XZB0 460 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 TECPR1Q7Z6L1 1165 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 MSLNLQ96KJ4 702 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 COPS8Q99627 209 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 TRMT61BQ9BVS5 477 aaKnown RBP17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 SPATA16Q9BXB7 569 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 FBRSL1Q9HCM7 1045 aaKnown RBP17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 LMCD1Q9NZU5 365 aa17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 MBD1Q9UIS9 605 aaPredicted RBP17.16■□□□□ 0.34
THUMPD2-201ENST00000378727 LRRK1Q38SD2 2015 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 UBFD1O14562 309 aaKnown RBP17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 CCDC22O60826 627 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 SUPT7LO94864 414 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 SNUPNO95149 360 aaKnown RBP17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 JUNP05412 331 aaKnown RBP17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 ITGB7P26010 798 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 MAGEA9P43362 315 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 HK2P52789 917 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 HK3P52790 923 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 ITPRIPL2Q3MIP1 535 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 SH2D4BQ5SQS7 431 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 GPRC6AQ5T6X5 926 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 EGFLAMQ63HQ2 1017 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 SEL1L3Q68CR1 1132 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 TREML1Q86YW5 311 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 C10orf67Q8IYJ2 551 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 MICALL1Q8N3F8 863 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 UCMAQ8WVF2 138 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 ULK4Q96C45 1275 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 SLC7A6OSQ96CW6 309 aaPredicted RBP17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 PTCD3Q96EY7 689 aaKnown RBP17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 SMOXQ9NWM0 555 aa17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 NFKBIL1Q9UBC1 381 aaPredicted RBP17.15■□□□□ 0.34
THUMPD2-201ENST00000378727 PLK4O00444 970 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 KLK8O60259 260 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 ATP5HO75947 161 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 GFAPP14136 432 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 GRIA2P42262 883 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 MTHFRP42898 656 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 SOX9P48436 509 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 GALNT1Q10472 559 aaPredicted RBP17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 KRT72Q14CN4 511 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 HENMT1Q5T8I9 393 aaKnown RBP17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 ERAP2Q6P179 960 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 CUZD1Q86UP6 607 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 KIF2BQ8N4N8 673 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 KLHL29Q96CT2 875 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 ERLEC1Q96DZ1 483 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 OR52B2Q96RD2 323 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 RIOK2Q9BVS4 552 aaKnown RBP17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 CCDC106Q9BWC9 280 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 NUF2Q9BZD4 464 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 MTCH2Q9Y6C9 303 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 BRWD1Q9NSI6 2320 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 TICRRQ7Z2Z1 1910 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 SYCE1LA8MT33 242 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 TSPAN8P19075 237 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 KCNJ2P63252 427 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 UBAP2LQ14157 1087 aaKnown RBP17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 FBXO39Q8N4B4 442 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 ZBTB2Q8N680 514 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 DTX3LQ8TDB6 740 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 SUSD6Q92537 303 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 WDR55Q9H6Y2 383 aaPredicted RBP17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 PRSS16Q9NQE7 514 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 CACNA2D2Q9NY47 1150 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 VTI1BQ9UEU0 232 aa17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 TSR3Q9UJK0 312 aaKnown RBP17.14■□□□□ 0.33
THUMPD2-201ENST00000378727 CCDC189A1A4V9 331 aa17.13■□□□□ 0.33
THUMPD2-201ENST00000378727 FADS2P1A8MWK0 482 aa17.13■□□□□ 0.33
THUMPD2-201ENST00000378727 SLCO1B7G3V0H7 640 aa17.13■□□□□ 0.33
THUMPD2-201ENST00000378727 ELFN1P0C7U0 828 aa17.13■□□□□ 0.33
THUMPD2-201ENST00000378727 CDH13P55290 713 aa17.13■□□□□ 0.33
THUMPD2-201ENST00000378727 ACSBG2Q5FVE4 666 aa17.13■□□□□ 0.33
THUMPD2-201ENST00000378727 FAM219BQ5XKK7 198 aa17.13■□□□□ 0.33
THUMPD2-201ENST00000378727 PPP1R36Q96LQ0 422 aa17.13■□□□□ 0.33
THUMPD2-201ENST00000378727 NSUN5Q96P11 429 aaKnown RBP17.13■□□□□ 0.33
THUMPD2-201ENST00000378727 TRMOQ9BU70 441 aa17.13■□□□□ 0.33
THUMPD2-201ENST00000378727 WRAP53Q9BUR4 548 aaKnown RBP17.13■□□□□ 0.33
THUMPD2-201ENST00000378727 LRMDAQ9H2I8 198 aa17.13■□□□□ 0.33
THUMPD2-201ENST00000378727 EML4Q9HC35 981 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms