RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 POMCP01189 267 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 ABCB1P08183 1280 aaPredicted RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 TIE1P35590 1138 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 ST8SIA6P61647 398 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 ADAM17P78536 824 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 SULT2A1Q06520 285 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 GALNT2Q10471 571 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 GTF2H2Q13888 395 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 GNASQ5JWF2 1037 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 GTF2H2CQ6P1K8 395 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 NSMCE3Q96MG7 304 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 PANX1Q96RD7 426 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 OSBPL2Q9H1P3 480 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 KLRG2A4D1S0 409 aaPredicted RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 PRRG1O14668 218 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 FFAR3O14843 346 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 GPR42O15529 346 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 RNASEH2AO75792 299 aaKnown RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 NTRK1P04629 796 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 DARSP14868 501 aaKnown RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 CRATP43155 626 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 MRPS6P82932 125 aaKnown RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 B3GNT9Q6UX72 402 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 TTC29Q8NA56 475 aaPredicted RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 SPPL2BQ8TCT7 592 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 ZNF490Q9ULM2 529 aaPredicted RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 ITGB4P16144 1822 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 SGTAO43765 313 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 KERAO60938 352 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 MTHFD1P11586 935 aaKnown RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 UGT2B15P54855 530 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 CTC1Q2NKJ3 1217 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 FAM43BQ6ZT52 329 aaPredicted RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 R3HCC1LQ7Z5L2 792 aaKnown RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 GALNT5Q7Z7M9 940 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 METTL3Q86U44 580 aaKnown RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 TAC4Q86UU9 113 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 ARMC8Q8IUR7 673 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 SLC13A3Q8WWT9 602 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 NDRG1Q92597 394 aaKnown RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 TMBIM1Q969X1 311 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 GAD1Q99259 594 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 ANKRD60Q9BZ19 345 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 SPRTNQ9H040 489 aaPredicted RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 ING4Q9UNL4 249 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 TIMM22Q9Y584 194 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 SNX8Q9Y5X2 465 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 KIAA1551Q9HCM1 1747 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 SCN7AQ01118 1682 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 SDHDO14521 159 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 PLSCR1O15162 318 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 TOP3BO95985 862 aaKnown RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 CYP2A6P11509 494 aaPredicted RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 PRPS2P11908 318 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 POLR2EP19388 210 aaKnown RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 GSK3BP49841 420 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 YBEYP58557 167 aaPredicted RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 CHSY3Q70JA7 882 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 MON1AQ86VX9 555 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 BTN2A3PQ96KV6 586 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 BCL7BQ9BQE9 202 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 STOML2Q9UJZ1 356 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 PSAT1Q9Y617 370 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 PHLPP1O60346 1717 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 A0A1W2PP18 115 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 EFCAB9A8MZ26 197 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 ZBTB7AO95365 584 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 AHSGP02765 367 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 MAPKAPK2P49137 400 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 TPTEP56180 551 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 CACNG1Q06432 222 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 CEACAM7Q14002 265 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 COQ5Q5HYK3 327 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 LBX2Q6XYB7 198 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 PLD6Q8N2A8 252 aaKnown RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 RNFT2Q96EX2 444 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 MYH11P35749 1972 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 BUD23O43709 281 aaKnown RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 GPC1P35052 558 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 SCNN1GP51170 649 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 IL10RBQ08334 325 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 GRM2Q14416 872 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 IKBIPQ70UQ0 350 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 ZZZ3Q8IYH5 903 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 MED8Q96G25 268 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 GPR21Q99679 349 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 ASB8Q9H765 288 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 TMEM233B4DJY2 109 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 MT-CYBP00156 380 aaPredicted RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 FTH1P02794 183 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 SERPIND1P05546 499 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 ZBTB48P10074 688 aaPredicted RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 BMP2P12643 396 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 PBX3P40426 434 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 TXNL4AP83876 142 aaKnown RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 GNA12Q03113 381 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 BICRALQ6AI39 1079 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 THOC7Q6I9Y2 204 aaKnown RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 RNF19BQ6ZMZ0 732 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms