RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CAMKK1Q8N5S9 505 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 RNF148Q8N7C7 305 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 POU5F2Q8N7G0 328 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 INPP5DQ92835 1189 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 REPS1Q96D71 796 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 CMTM5Q96DZ9 223 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 CHFRQ96EP1 664 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 ZSWIM3Q96MP5 696 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 MYCBPQ99417 103 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 CFHR5Q9BXR6 569 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 CSNK1G1Q9HCP0 422 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 RAB21Q9UL25 225 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 PSME2Q9UL46 239 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 TIMM22Q9Y584 194 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 OR1A2Q9Y585 309 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 ADH1BP00325 375 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 F11P03951 625 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 DCNP07585 359 aaKnown RBP8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 SRCP12931 536 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 HLA-FP30511 346 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 TLX1P31314 330 aaPredicted RBP8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 CCR4P51679 360 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 NCALDP61601 193 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 ZNF252P-AS1Q0IIN9 211 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 NAB1Q13506 487 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 SPIDRQ14159 915 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 KRT72Q14CN4 511 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 GPRC6AQ5T6X5 926 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 PAQR3Q6TCH7 311 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 LPCAT2Q7L5N7 544 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 LRRTM4Q86VH4 590 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 TMEM145Q8NBT3 493 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 ICA1LQ8NDH6 482 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 OR4E2Q8NGC2 313 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 OXNAD1Q96HP4 312 aaPredicted RBP8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 MRPL57Q9BQC6 102 aaKnown RBP8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 C1orf50Q9BV19 199 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 GID8Q9NWU2 228 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 SIT1Q9Y3P8 196 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 NBASA2RRP1 2371 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 ABLIM3O94929 683 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 SEMA4FO95754 770 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 TNFP01375 233 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 ESR1P03372 595 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 DRD1P21728 446 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 PREPP48147 710 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 INO80DQ53TQ3 878 aaPredicted RBP8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 EGFLAMQ63HQ2 1017 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 KYAT3Q6YP21 454 aaKnown RBP8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 PIWIL4Q7Z3Z4 852 aaKnown RBP8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 MFSD6LQ8IWD5 586 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 SLC43A3Q8NBI5 491 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 FAM162AQ96A26 154 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 SEC16BQ96JE7 1060 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 ZSCAN5AQ9BUG6 496 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 TRIM15Q9C019 465 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 THAP1Q9NVV9 213 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 GRID2O43424 1007 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 DCXO43602 365 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 LDB2O43679 373 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 MAFKO60675 156 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 ATP6V1E1P36543 226 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 PTGIRP43119 386 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 CLCN4P51793 760 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 DUSP6Q16828 381 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 LRRC36Q1X8D7 754 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 XKR4Q5GH76 650 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 MTDHQ86UE4 582 aaKnown RBP8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 PHC3Q8NDX5 983 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 DTX3LQ8TDB6 740 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 ZNF75CPQ92670 426 aaPredicted RBP8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 TSACCQ96A04 125 aaPredicted RBP8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 KCNK12Q9HB15 430 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 SLC2A4RGQ9NR83 387 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 ARMCX1Q9P291 453 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 SNX6Q9UNH7 406 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 ENTPD4Q9Y227 616 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 H3BQF6 201 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 OR1F1O43749 312 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 PGLSO95336 258 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 PLA2G16P53816 162 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 RPL38P63173 70 aaKnown RBP8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 RPS21P63220 83 aaKnown RBP8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 RGS1Q08116 209 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 TRAF2Q12933 501 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 STX5Q13190 355 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 QPCTQ16769 361 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 TJAP1Q5JTD0 557 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 GPRIN3Q6ZVF9 776 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 TSPAN33Q86UF1 283 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 GJD3Q8N144 294 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 CLHC1Q8NHS4 586 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 TFGQ92734 400 aaPredicted RBP8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 UBE2E3Q969T4 207 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 OTUB1Q96FW1 271 aaPredicted RBP8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 HAUS8Q9BT25 410 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 SLC17A7Q9P2U7 560 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 USP3Q9Y6I4 520 aa8.38□□□□□ -1.07
CRNKL1-202ENST00000377340 SPTAN1Q13813 2472 aaKnown RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 ANKRD12Q6UB98 2062 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms