RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 EIF2B4Q9UI10 523 aaKnown RBP20.01■□□□□ 0.79
VSX1-202ENST00000376709 CROTQ9UKG9 612 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 SARDHQ9UL12 918 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 DHRS7Q9Y394 339 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 ACOT8O14734 319 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 CLDN7O95471 211 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 ESRRBO95718 433 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 ITGALP20701 1170 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 PAX7P23759 505 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 PRDX3P30048 256 aaKnown RBP20.01■□□□□ 0.79
VSX1-202ENST00000376709 HNF1BP35680 557 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 NFATC2Q13469 925 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 SFT2D3Q587I9 215 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 CCDC149Q6ZUS6 474 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 SYVN1Q86TM6 617 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 PHYKPLQ8IUZ5 450 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 PCYOX1LQ8NBM8 494 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 OR56A4Q8NGH8 313 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 PPP2R3CQ969Q6 453 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 CORO1BQ9BR76 489 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 LRRC3Q9BY71 257 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 SMG9Q9H0W8 520 aaKnown RBP20.01■□□□□ 0.79
VSX1-202ENST00000376709 VCXQ9H320 206 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 SCOCQ9UIL1 159 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 APPL1Q9UKG1 709 aa20.01■□□□□ 0.79
VSX1-202ENST00000376709 A8MX80 341 aa20■□□□□ 0.79
VSX1-202ENST00000376709 LEFTY2O00292 366 aa20■□□□□ 0.79
VSX1-202ENST00000376709 CYBBP04839 570 aa20■□□□□ 0.79
VSX1-202ENST00000376709 LINGO3P0C6S8 592 aa20■□□□□ 0.79
VSX1-202ENST00000376709 SERPINA4P29622 427 aa20■□□□□ 0.79
VSX1-202ENST00000376709 PSMD8P48556 350 aa20■□□□□ 0.79
VSX1-202ENST00000376709 CSNK1DP48730 415 aa20■□□□□ 0.79
VSX1-202ENST00000376709 AQP4P55087 323 aa20■□□□□ 0.79
VSX1-202ENST00000376709 RALGDSQ12967 914 aa20■□□□□ 0.79
VSX1-202ENST00000376709 TRIM25Q14258 630 aaKnown RBP20■□□□□ 0.79
VSX1-202ENST00000376709 SNX20Q7Z614 316 aa20■□□□□ 0.79
VSX1-202ENST00000376709 RBFAQ8N0V3 343 aa20■□□□□ 0.79
VSX1-202ENST00000376709 NAT14Q8WUY8 206 aa20■□□□□ 0.79
VSX1-202ENST00000376709 LRGUKQ96M69 825 aa20■□□□□ 0.79
VSX1-202ENST00000376709 EBF3Q9H4W6 596 aa20■□□□□ 0.79
VSX1-202ENST00000376709 GNPTGQ9UJJ9 305 aa20■□□□□ 0.79
VSX1-202ENST00000376709 BBIP1A8MTZ0 92 aa20■□□□□ 0.79
VSX1-202ENST00000376709 GAPDHSO14556 408 aaPredicted RBP20■□□□□ 0.79
VSX1-202ENST00000376709 UBTFL6P0CB48 400 aaPredicted RBP20■□□□□ 0.79
VSX1-202ENST00000376709 UROSP10746 265 aa20■□□□□ 0.79
VSX1-202ENST00000376709 ARL1P40616 181 aaPredicted RBP20■□□□□ 0.79
VSX1-202ENST00000376709 HTRA4P83105 476 aaPredicted RBP20■□□□□ 0.79
VSX1-202ENST00000376709 LILRA6Q6PI73 481 aa20■□□□□ 0.79
VSX1-202ENST00000376709 EFL1Q7Z2Z2 1120 aaKnown RBP20■□□□□ 0.79
VSX1-202ENST00000376709 OR2AP1Q8NGE2 309 aa20■□□□□ 0.79
VSX1-202ENST00000376709 GATA6Q92908 595 aa20■□□□□ 0.79
VSX1-202ENST00000376709 CCDC97Q96F63 343 aaPredicted RBP20■□□□□ 0.79
VSX1-202ENST00000376709 NR1H4Q96RI1 486 aaPredicted RBP20■□□□□ 0.79
VSX1-202ENST00000376709 BOCQ9BWV1 1114 aa20■□□□□ 0.79
VSX1-202ENST00000376709 NUSAP1Q9BXS6 441 aaKnown RBP20■□□□□ 0.79
VSX1-202ENST00000376709 IL26Q9NPH9 171 aa20■□□□□ 0.79
VSX1-202ENST00000376709 ASAH2Q9NR71 780 aa20■□□□□ 0.79
VSX1-202ENST00000376709 ZDHHC7Q9NXF8 308 aa20■□□□□ 0.79
VSX1-202ENST00000376709 NUDT4Q9NZJ9 180 aa20■□□□□ 0.79
VSX1-202ENST00000376709 CXXC1Q9P0U4 656 aaPredicted RBP20■□□□□ 0.79
VSX1-202ENST00000376709 MAGEA13PA6NCF6 341 aa19.99■□□□□ 0.79
VSX1-202ENST00000376709 CAPN8A6NHC0 703 aa19.99■□□□□ 0.79
VSX1-202ENST00000376709 E2F3O00716 465 aa19.99■□□□□ 0.79
VSX1-202ENST00000376709 BNIP3LO60238 219 aa19.99■□□□□ 0.79
VSX1-202ENST00000376709 ADH1AP07327 375 aa19.99■□□□□ 0.79
VSX1-202ENST00000376709 IDO1P14902 403 aa19.99■□□□□ 0.79
VSX1-202ENST00000376709 ITGB6P18564 788 aa19.99■□□□□ 0.79
VSX1-202ENST00000376709 DGKKQ5KSL6 1271 aa19.99■□□□□ 0.79
VSX1-202ENST00000376709 RARS2Q5T160 578 aaKnown RBP19.99■□□□□ 0.79
VSX1-202ENST00000376709 HACD2Q6Y1H2 254 aa19.99■□□□□ 0.79
VSX1-202ENST00000376709 GPRIN3Q6ZVF9 776 aa19.99■□□□□ 0.79
VSX1-202ENST00000376709 ADAMTSL2Q86TH1 951 aa19.99■□□□□ 0.79
VSX1-202ENST00000376709 CMTM8Q8IZV2 173 aa19.99■□□□□ 0.79
VSX1-202ENST00000376709 ROPN1LQ96C74 230 aa19.99■□□□□ 0.79
VSX1-202ENST00000376709 INTS6Q9UL03 887 aaKnown RBP19.99■□□□□ 0.79
VSX1-202ENST00000376709 ASB1Q9Y576 335 aa19.99■□□□□ 0.79
VSX1-202ENST00000376709 SCN8AQ9UQD0 1980 aa19.99■□□□□ 0.79
VSX1-202ENST00000376709 GLYATL1P3A0A0U1RQE8 302 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 ANGPT2O15123 496 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 TRIM24O15164 1050 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 ZNF821O75541 412 aaPredicted RBP19.98■□□□□ 0.79
VSX1-202ENST00000376709 STK19P49842 368 aaPredicted RBP19.98■□□□□ 0.79
VSX1-202ENST00000376709 OGFRL1Q5TC84 451 aaPredicted RBP19.98■□□□□ 0.79
VSX1-202ENST00000376709 CLDN19Q8N6F1 224 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 KREMEN2Q8NCW0 462 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 GRIN3AQ8TCU5 1115 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 PDLIM5Q96HC4 596 aaKnown RBP19.98■□□□□ 0.79
VSX1-202ENST00000376709 KLHL32Q96NJ5 620 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 SLC39A3Q9BRY0 314 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 SLC46A2Q9BY10 475 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 PCDHAC1Q9H158 963 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 PFDN4Q9NQP4 134 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 SDR39U1Q9NRG7 319 aaPredicted RBP19.98■□□□□ 0.79
VSX1-202ENST00000376709 CRLS1Q9UJA2 301 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 ZNF225Q9UK10 706 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 LAMA3Q16787 3333 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 CHD7Q9P2D1 2997 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 PRORSD1PA6NEY8 169 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 PEX1O43933 1283 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 FGBP02675 491 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms