RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 MCOLN3Q8TDD5 553 aa12.3□□□□□ -0.44
DDR1-224ENST00000376567 RMND5BQ96G75 393 aaPredicted RBP12.3□□□□□ -0.44
DDR1-224ENST00000376567 TSGA13Q96PP4 275 aa12.3□□□□□ -0.44
DDR1-224ENST00000376567 MTERF1Q99551 399 aaKnown RBP12.3□□□□□ -0.44
DDR1-224ENST00000376567 SMAD5Q99717 465 aaKnown RBP12.3□□□□□ -0.44
DDR1-224ENST00000376567 DGCR6LQ9BY27 220 aa12.3□□□□□ -0.44
DDR1-224ENST00000376567 SOX17Q9H6I2 414 aaPredicted RBP12.3□□□□□ -0.44
DDR1-224ENST00000376567 TMEM248Q9NWD8 314 aa12.3□□□□□ -0.44
DDR1-224ENST00000376567 SLCO3A1Q9UIG8 710 aa12.3□□□□□ -0.44
DDR1-224ENST00000376567 HHLA1C9JL84 531 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 PRDX3P30048 256 aaKnown RBP12.29□□□□□ -0.44
DDR1-224ENST00000376567 SLC6A4P31645 630 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 UFM1P61960 85 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 FNDC3BQ53EP0 1204 aaKnown RBP12.29□□□□□ -0.44
DDR1-224ENST00000376567 FBXL19Q6PCT2 694 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 SATL1Q86VE3 508 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 PIANPQ8IYJ0 282 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 SPPL2AQ8TCT8 520 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 ACTRT2Q8TDY3 377 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 PTCD2Q8WV60 388 aaKnown RBP12.29□□□□□ -0.44
DDR1-224ENST00000376567 SCAMP4Q969E2 229 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 MFSD1Q9H3U5 465 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 VPS51Q9UID3 782 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 MAN1A2O60476 641 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 CD1EP15812 388 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 IMPDH1P20839 514 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 ARRB2P32121 409 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 PRIM2P49643 509 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 LSM3P62310 102 aaKnown RBP12.29□□□□□ -0.44
DDR1-224ENST00000376567 OR4D1Q15615 310 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 RSPO2Q6UXX9 243 aaPredicted RBP12.29□□□□□ -0.44
DDR1-224ENST00000376567 NECAB2Q7Z6G3 386 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 SYT12Q8IV01 421 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 PGBD3Q8N328 593 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 OR52B6Q8NGF0 335 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 ZNF461Q8TAF7 563 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 PAWRQ96IZ0 340 aaKnown RBP12.29□□□□□ -0.44
DDR1-224ENST00000376567 OR52E6Q96RD3 313 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 SLC22A12Q96S37 553 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 BOCQ9BWV1 1114 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 VPS4AQ9UN37 437 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 M0QZQ0 153 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 RFPL2O75678 378 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 STC2O76061 302 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 RPIAP49247 311 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 HERVK_113P63132 956 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 LIPEQ05469 1076 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 DGCR6Q14129 220 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 SETMARQ53H47 684 aaPredicted RBP12.29□□□□□ -0.44
DDR1-224ENST00000376567 MAVSQ7Z434 540 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 ADAMTSL2Q86TH1 951 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 HORMAD1Q86X24 394 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 BBS7Q8IWZ6 715 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 RBFAQ8N0V3 343 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 TAGAPQ8N103 731 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 UMODL1-AS1Q8N2C9 162 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 CPSF7Q8N684 471 aaKnown RBP12.29□□□□□ -0.44
DDR1-224ENST00000376567 ATG16L2Q8NAA4 619 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 SH3RF2Q8TEC5 729 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 PTERQ96BW5 349 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 MYEOVQ96EZ4 313 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 ERVK-6Q9BXR3 956 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 RNF38Q9H0F5 515 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 GEMIN8Q9NWZ8 242 aaKnown RBP12.29□□□□□ -0.44
DDR1-224ENST00000376567 GNPTGQ9UJJ9 305 aa12.29□□□□□ -0.44
DDR1-224ENST00000376567 PRPF19Q9UMS4 504 aaKnown RBP12.29□□□□□ -0.44
DDR1-224ENST00000376567 ZNFX1Q9P2E3 1918 aaKnown RBP12.29□□□□□ -0.44
DDR1-224ENST00000376567 MLYCDO95822 493 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 YAP1P46937 504 aaKnown RBP12.28□□□□□ -0.44
DDR1-224ENST00000376567 STC1P52823 247 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 ATP6V0D1P61421 351 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 CYP4F2P78329 520 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 IL5RAQ01344 420 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 MS4A2Q01362 244 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 SPIDRQ14159 915 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 TRIM25Q14258 630 aaKnown RBP12.28□□□□□ -0.44
DDR1-224ENST00000376567 ZFP1Q6P2D0 407 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 LPCAT2Q7L5N7 544 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 APCDD1Q8J025 514 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 ZNF555Q8NEP9 628 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 PLAC1Q9HBJ0 212 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 RHBDL2Q9NX52 303 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 ANAPC2Q9UJX6 822 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 ZNF711Q9Y462 761 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 WNT6Q9Y6F9 365 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 ZNF840PA6NDX5 716 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 ZNF487B1APH4 448 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 GRID2O43424 1007 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 SMAD6O43541 496 aaKnown RBP12.28□□□□□ -0.44
DDR1-224ENST00000376567 TLL1O43897 1013 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 CDK14O94921 469 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 RANBP1P43487 201 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 POLR2JP52435 117 aaKnown RBP12.28□□□□□ -0.44
DDR1-224ENST00000376567 SH3BP2P78314 561 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 ACSM2AQ08AH3 577 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 FAM174BQ3ZCQ3 159 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 XKR6Q5GH73 641 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 TECRLQ5HYJ1 363 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 RAB41Q5JT25 222 aa12.28□□□□□ -0.44
DDR1-224ENST00000376567 ACSM2BQ68CK6 577 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms