RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 ICE1Q9Y2F5 2266 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 A6NCN8 305 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 MKRN2OSH3BPM6 223 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 MATN3O15232 486 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 SNX2O60749 519 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 DNAJC6O75061 913 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 AGFG2O95081 481 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 ASMTLO95671 621 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 PDHA1P08559 390 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 RNF224P0DH78 156 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 ZFXP17010 805 aaPredicted RBP12.97□□□□□ -0.33
CLCN6-205ENST00000376492 GFERP55789 205 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 PTSQ03393 145 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 GBE1Q04446 702 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 MAP7Q14244 749 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 IFI16Q16666 785 aaKnown RBP12.97□□□□□ -0.33
CLCN6-205ENST00000376492 RALGPS1Q5JS13 557 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 ARMC12Q5T9G4 340 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 MARC1Q5VT66 337 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 TIGD7Q6NT04 549 aaPredicted RBP12.97□□□□□ -0.33
CLCN6-205ENST00000376492 TCTN3Q6NUS6 607 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 IYDQ6PHW0 289 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 CHST15Q7LFX5 561 aaPredicted RBP12.97□□□□□ -0.33
CLCN6-205ENST00000376492 DAAM2Q86T65 1068 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 CCDC13Q8IYE1 715 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 KATNAL2Q8IYT4 538 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 BBS5Q8N3I7 341 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 PLD5Q8N7P1 536 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 MAML1Q92585 1016 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 RNF25Q96BH1 459 aaPredicted RBP12.97□□□□□ -0.33
CLCN6-205ENST00000376492 RIOK2Q9BVS4 552 aaKnown RBP12.97□□□□□ -0.33
CLCN6-205ENST00000376492 GOLPH3Q9H4A6 298 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 DTLQ9NZJ0 730 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 ZNHIT2Q9UHR6 403 aa12.97□□□□□ -0.33
CLCN6-205ENST00000376492 MN1Q10571 1320 aaPredicted RBP12.96□□□□□ -0.33
CLCN6-205ENST00000376492 DNAJB5O75953 348 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 ZRANB2O95218 330 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLCN6-205ENST00000376492 KRT1P04264 644 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 ACP5P13686 325 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 TNNT1P13805 278 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 NFKBIAP25963 317 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 CDKN2BP42772 138 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 MMP13P45452 471 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 SH3BP2P78314 561 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 FOXM1Q08050 763 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 ODF2Q5BJF6 829 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 CAPRIN2Q6IMN6 1127 aaKnown RBP12.96□□□□□ -0.33
CLCN6-205ENST00000376492 MFSD7Q6UXD7 560 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 RCOR2Q8IZ40 523 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 GALNT6Q8NCL4 622 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 HDAC11Q96DB2 347 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 ELMO2Q96JJ3 720 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 STN1Q9H668 368 aaKnown RBP12.96□□□□□ -0.33
CLCN6-205ENST00000376492 PRDM8Q9NQV8 689 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 OGFRQ9NZT2 677 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 AMACRQ9UHK6 382 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 TLK1Q9UKI8 766 aa12.96□□□□□ -0.33
CLCN6-205ENST00000376492 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLCN6-205ENST00000376492 CDC14CA4D256 554 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 APOL1O14791 398 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 KATNA1O75449 491 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 RFPL1O75677 317 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 ANKRD34CP0C6C1 535 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 CES1P23141 567 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 STC1P52823 247 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 PMS2P54278 862 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 EPHA4P54764 986 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 NAP1L1P55209 391 aaKnown RBP12.95□□□□□ -0.34
CLCN6-205ENST00000376492 PPIDQ08752 370 aaKnown RBP12.95□□□□□ -0.34
CLCN6-205ENST00000376492 TFDP2Q14188 446 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 IHHQ14623 411 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 C6orf15Q6UXA7 325 aaPredicted RBP12.95□□□□□ -0.34
CLCN6-205ENST00000376492 ZNF765Q7L2R6 523 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 KIAA1328Q86T90 577 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 SLC9B2Q86UD5 537 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLCN6-205ENST00000376492 LRRC57Q8N9N7 239 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 EXD1Q8NHP7 514 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.95□□□□□ -0.34
CLCN6-205ENST00000376492 HERPUD2Q9BSE4 406 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 CPNE7Q9UBL6 633 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 CNOT6Q9ULM6 557 aaKnown RBP12.95□□□□□ -0.34
CLCN6-205ENST00000376492 POLHQ9Y253 713 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 PPIL1Q9Y3C6 166 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 PCDHB3Q9Y5E6 796 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 PCDHA3Q9Y5H8 950 aa12.95□□□□□ -0.34
CLCN6-205ENST00000376492 A1L4Q6 167 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 TTLL8A6PVC2 850 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 FADS2P1A8MWK0 482 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 KIF5CO60282 957 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 FZD6O60353 706 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 SEMA7AO75326 666 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 VPS4BO75351 444 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 KIAA0754O94854 1291 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 F3P13726 295 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 TYRP1P17643 537 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 CTNNA1P35221 906 aaKnown RBP12.94□□□□□ -0.34
CLCN6-205ENST00000376492 NR2C2P49116 596 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 SEPHS1P49903 392 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 PDK1Q15118 436 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms