RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 INSCQ1MX18 579 aa14.71□□□□□ -0.05
CLCN6-204ENST00000376491 DEFB109BQ30KR1 87 aa14.71□□□□□ -0.05
CLCN6-204ENST00000376491 C16orf46Q6P387 395 aa14.71□□□□□ -0.05
CLCN6-204ENST00000376491 ABRAXAS1Q6UWZ7 409 aa14.71□□□□□ -0.05
CLCN6-204ENST00000376491 SPATA22Q8NHS9 363 aa14.71□□□□□ -0.05
CLCN6-204ENST00000376491 CTNNBL1Q8WYA6 563 aaPredicted RBP14.71□□□□□ -0.05
CLCN6-204ENST00000376491 ABHD17AQ96GS6 310 aa14.71□□□□□ -0.05
CLCN6-204ENST00000376491 OLFM3Q96PB7 478 aa14.71□□□□□ -0.05
CLCN6-204ENST00000376491 TGM7Q96PF1 710 aa14.71□□□□□ -0.05
CLCN6-204ENST00000376491 SLC25A51Q9H1U9 297 aa14.71□□□□□ -0.05
CLCN6-204ENST00000376491 SPO11Q9Y5K1 396 aa14.71□□□□□ -0.05
CLCN6-204ENST00000376491 RPS6KL1Q9Y6S9 549 aa14.71□□□□□ -0.05
CLCN6-204ENST00000376491 COL12A1Q99715 3063 aa14.71□□□□□ -0.06
CLCN6-204ENST00000376491 KMOO15229 486 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 KIF1CO43896 1103 aaKnown RBP14.7□□□□□ -0.06
CLCN6-204ENST00000376491 MTA2O94776 668 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 MT-CYBP00156 380 aaPredicted RBP14.7□□□□□ -0.06
CLCN6-204ENST00000376491 TMEM253P0C7T8 217 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 AMD1P17707 334 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 TCN2P20062 427 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 RPL10P27635 214 aaKnown RBP14.7□□□□□ -0.06
CLCN6-204ENST00000376491 CASRP41180 1078 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 TPM4P67936 248 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 SRSF1Q07955 248 aaKnown RBP eCLIP14.7□□□□□ -0.06
CLCN6-204ENST00000376491 IGFBP7Q16270 282 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 CRTC2Q53ET0 693 aaPredicted RBP14.7□□□□□ -0.06
CLCN6-204ENST00000376491 PDPK2PQ6A1A2 396 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 C11orf96Q7Z7L8 435 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 LRRTM4Q86VH4 590 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 ESX1Q8N693 406 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 C9orf43Q8TAL5 461 aaPredicted RBP14.7□□□□□ -0.06
CLCN6-204ENST00000376491 RSC1A1Q92681 617 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 TIMM29Q9BSF4 260 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 GPR63Q9BZJ6 419 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 ULBP3Q9BZM4 244 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 ZNF768Q9H5H4 540 aaKnown RBP14.7□□□□□ -0.06
CLCN6-204ENST00000376491 BPIFA1Q9NP55 256 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 RAD18Q9NS91 495 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 ANAPC2Q9UJX6 822 aa14.7□□□□□ -0.06
CLCN6-204ENST00000376491 OR52A4PA6NMU1 304 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 PDZK1P1A8MUH7 402 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 APOL1O14791 398 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 CDK14O94921 469 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 NDST3O95803 873 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 DRG2P55039 364 aaKnown RBP14.69□□□□□ -0.06
CLCN6-204ENST00000376491 PDK1Q15118 436 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 SLC14A2Q15849 920 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 VSIG1Q86XK7 387 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 TRIM48Q8IWZ4 208 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 GALNT6Q8NCL4 622 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 SLC35G2Q8TBE7 412 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.69□□□□□ -0.06
CLCN6-204ENST00000376491 APOBEC4Q8WW27 367 aaKnown RBP14.69□□□□□ -0.06
CLCN6-204ENST00000376491 OR6C1Q96RD1 312 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 GLOD4Q9HC38 313 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 SLC40A1Q9NP59 571 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 POT1Q9NUX5 634 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 LCMT1Q9UIC8 334 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 WDR37Q9Y2I8 494 aa14.69□□□□□ -0.06
CLCN6-204ENST00000376491 TOX3O15405 576 aaPredicted RBP14.68□□□□□ -0.06
CLCN6-204ENST00000376491 VEGFDO43915 354 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 PMPCBO75439 489 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 FURINP09958 794 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 CA5AP35218 305 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 DLSTP36957 453 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 NOP2P46087 812 aaKnown RBP14.68□□□□□ -0.06
CLCN6-204ENST00000376491 FOXK1P85037 733 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 MC1RQ01726 317 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 GPR18Q14330 331 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 NOMO1Q15155 1222 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 ATP13A5Q4VNC0 1218 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 TEX44Q53QW1 395 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 C6orf15Q6UXA7 325 aaPredicted RBP14.68□□□□□ -0.06
CLCN6-204ENST00000376491 WASH2PQ6VEQ5 465 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 PRSS42Q7Z5A4 293 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 RFX6Q8HWS3 928 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 RNF25Q96BH1 459 aaPredicted RBP14.68□□□□□ -0.06
CLCN6-204ENST00000376491 ELMO2Q96JJ3 720 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 VPS35Q96QK1 796 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 MAK16Q9BXY0 300 aaKnown RBP14.68□□□□□ -0.06
CLCN6-204ENST00000376491 XPO4Q9C0E2 1151 aaKnown RBP14.68□□□□□ -0.06
CLCN6-204ENST00000376491 WASH6PQ9NQA3 447 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 UBP1Q9NZI7 540 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 TRIM10Q9UDY6 481 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 CROTQ9UKG9 612 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.68□□□□□ -0.061e-6■■■■□ 24.1
CLCN6-204ENST00000376491 KCNMB2Q9Y691 235 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 RELNP78509 3460 aa14.68□□□□□ -0.06
CLCN6-204ENST00000376491 SSU72P8A0A1W2PR75 194 aa14.67□□□□□ -0.06
CLCN6-204ENST00000376491 GOLGA6L3A6NEY3 463 aa14.67□□□□□ -0.06
CLCN6-204ENST00000376491 K7EM74 188 aa14.67□□□□□ -0.06
CLCN6-204ENST00000376491 PPP1R12AO14974 1030 aaPredicted RBP14.67□□□□□ -0.06
CLCN6-204ENST00000376491 KIAA0754O94854 1291 aa14.67□□□□□ -0.06
CLCN6-204ENST00000376491 NDUFA10O95299 355 aa14.67□□□□□ -0.06
CLCN6-204ENST00000376491 KRT1P04264 644 aa14.67□□□□□ -0.06
CLCN6-204ENST00000376491 FGF5P12034 268 aa14.67□□□□□ -0.06
CLCN6-204ENST00000376491 NR1D1P20393 614 aa14.67□□□□□ -0.06
CLCN6-204ENST00000376491 IDSP22304 550 aa14.67□□□□□ -0.06
CLCN6-204ENST00000376491 PTPN3P26045 913 aa14.67□□□□□ -0.06
CLCN6-204ENST00000376491 CD68P34810 354 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms