RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 ITGALP20701 1170 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 KCNA4P22459 653 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 RPS3P23396 243 aaKnown RBP eCLIP20.96■□□□□ 0.953e-7■■■■□ 20.6
HLA-C-201ENST00000376228 CDKN1CP49918 316 aaPredicted RBP20.96■□□□□ 0.95
HLA-C-201ENST00000376228 PTSQ03393 145 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 ARSIQ5FYB1 569 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 CES4AQ5XG92 561 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 LRRC66Q68CR7 880 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 KLC3Q6P597 504 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 RAVER1Q8IY67 606 aaKnown RBP20.96■□□□□ 0.95
HLA-C-201ENST00000376228 ZNF366Q8N895 744 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 TMIEQ8NEW7 156 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 PLEKHG4BQ96PX9 1271 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 TRIM55Q9BYV6 548 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 P2RY12Q9H244 342 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 TMEM245Q9H330 911 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 SYTL2Q9HCH5 934 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 TAS2R13Q9NYV9 303 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 NFKBIL1Q9UBC1 381 aaPredicted RBP20.96■□□□□ 0.95
HLA-C-201ENST00000376228 PCDHB1Q9Y5F3 818 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 PLXNB3Q9ULL4 1909 aa20.96■□□□□ 0.95
HLA-C-201ENST00000376228 ZNF292O60281 2723 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 GLYATL1P3A0A0U1RQE8 302 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 A0A0U1RQS6 177 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 UPK3BL1B0FP48 263 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 UPK3BL2E5RIL1 263 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 PRNPP04156 253 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 CTSLP07711 333 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 HLA-EP13747 358 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 NDUFV2P19404 249 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 BCKDHBP21953 392 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 LHCGRP22888 699 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 VIPR1P32241 457 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 PGGT1BP53609 377 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 NFATC2Q13469 925 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 FNDC3BQ53EP0 1204 aaKnown RBP20.95■□□□□ 0.94
HLA-C-201ENST00000376228 USP39Q53GS9 565 aaKnown RBP20.95■□□□□ 0.94
HLA-C-201ENST00000376228 TECRLQ5HYJ1 363 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 TMEM207Q6UWW9 146 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 SERPINA13PQ6UXR4 307 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 TSPAN33Q86UF1 283 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 KIAA2013Q8IYS2 634 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 PPP1R14CQ8TAE6 165 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 SCYL1Q96KG9 808 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 B4GALT6Q9UBX8 382 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 MED16Q9Y2X0 877 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 USH1CQ9Y6N9 552 aa20.95■□□□□ 0.94
HLA-C-201ENST00000376228 PTPRZ1P23471 2315 aaPredicted RBP20.94■□□□□ 0.94
HLA-C-201ENST00000376228 UBA6A0AVT1 1052 aaPredicted RBP20.94■□□□□ 0.94
HLA-C-201ENST00000376228 CCDC189A1A4V9 331 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 TMEM114B3SHH9 223 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 PRAMEF1O95521 474 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 PYGLP06737 847 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 CCDC166P0CW27 439 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 TIMP2P16035 220 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 ZNF37AP17032 561 aaPredicted RBP20.94■□□□□ 0.94
HLA-C-201ENST00000376228 SKIV2L2P42285 1042 aaKnown RBP20.94■□□□□ 0.94
HLA-C-201ENST00000376228 ASPHQ12797 758 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 ENPP2Q13822 863 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 CSHL1Q14406 222 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 E2F5Q15329 346 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 C10orf82Q8WW14 230 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 DUSP15Q9H1R2 295 aaPredicted RBP20.94■□□□□ 0.94
HLA-C-201ENST00000376228 CD93Q9NPY3 652 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 RAD18Q9NS91 495 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 XPR1Q9UBH6 696 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 OAS3Q9Y6K5 1087 aaKnown RBP20.94■□□□□ 0.94
HLA-C-201ENST00000376228 BPTFQ12830 3046 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 RGSL1A5PLK6 1076 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 CCT8L1PA6NM43 557 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 TK2O00142 265 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 PRMT5O14744 637 aaPredicted RBP20.94■□□□□ 0.94
HLA-C-201ENST00000376228 EPHX1P07099 455 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 FMO4P31512 558 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 SPEM2Q0P670 501 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 IFT88Q13099 833 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 STARD3Q14849 445 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 PLK5Q496M5 336 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 SETMARQ53H47 684 aaPredicted RBP20.94■□□□□ 0.94
HLA-C-201ENST00000376228 C9orf64Q5T6V5 341 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 LIPMQ5VYY2 423 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 TAS2R42Q7RTR8 314 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 CACUL1Q86Y37 369 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 CRLF3Q8IUI8 442 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 GPR26Q8NDV2 337 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 ANKRD49Q8WVL7 239 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 KCNJ9Q92806 393 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 CCDC126Q96EE4 140 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 CDH19Q9H159 772 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 FAM96AQ9H5X1 160 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 ASB8Q9H765 288 aa20.94■□□□□ 0.94
HLA-C-201ENST00000376228 PLXNA2O75051 1894 aa20.93■□□□□ 0.94
HLA-C-201ENST00000376228 GOLGA8CPA6NN73 597 aa20.93■□□□□ 0.94
HLA-C-201ENST00000376228 VPS26AO75436 327 aa20.93■□□□□ 0.94
HLA-C-201ENST00000376228 RHOBTB1O94844 696 aa20.93■□□□□ 0.94
HLA-C-201ENST00000376228 C1SP09871 688 aa20.93■□□□□ 0.94
HLA-C-201ENST00000376228 ZNF7P17097 686 aaPredicted RBP20.93■□□□□ 0.94
HLA-C-201ENST00000376228 SLC1A6P48664 564 aa20.93■□□□□ 0.94
HLA-C-201ENST00000376228 SPINT3P49223 89 aa20.93■□□□□ 0.94
HLA-C-201ENST00000376228 DCDC1P59894 354 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms