RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 EGFLAMQ63HQ2 1017 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 XAF1Q6GPH4 301 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 LRRTM3Q86VH5 581 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 PTRH1Q86Y79 214 aaKnown RBP14□□□□□ -0.17
CLCNKA-202ENST00000375692 TMEM86AQ8N2M4 240 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 GABPB2Q8TAK5 448 aaPredicted RBP14□□□□□ -0.17
CLCNKA-202ENST00000375692 HASPINQ8TF76 798 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 HMCESQ96FZ2 354 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 NEURL2Q9BR09 285 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 ING2Q9H160 280 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 TRNAU1APQ9NX07 287 aaKnown RBP14□□□□□ -0.17
CLCNKA-202ENST00000375692 UXTQ9UBK9 157 aaPredicted RBP14□□□□□ -0.17
CLCNKA-202ENST00000375692 PADI3Q9ULW8 664 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 ADAM23O75077 832 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 CNTN5O94779 1100 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 CPNE6O95741 557 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 IL7RP16871 459 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 ZNF37AP17032 561 aaPredicted RBP14□□□□□ -0.17
CLCNKA-202ENST00000375692 IL12AP29459 219 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 SLC26A3P40879 764 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 AGTR2P50052 363 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 PHEXP78562 749 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 RCAN2Q14206 197 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 CYP2A13Q16696 494 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 TRIM71Q2Q1W2 868 aaKnown RBP14□□□□□ -0.17
CLCNKA-202ENST00000375692 SLC2A7Q6PXP3 512 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 TERB1Q8NA31 727 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 BLOC1S5Q8TDH9 187 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 ZNF639Q9UID6 485 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 FAM50BQ9Y247 325 aa14□□□□□ -0.17
CLCNKA-202ENST00000375692 CCDC162PA2VCL2 907 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 CD3EAPO15446 510 aaKnown RBP13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 SLC22A3O75751 556 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 SULT1C4O75897 302 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 SEC14L2O76054 403 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 PAPSS2O95340 614 aaPredicted RBP13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 IST1P53990 364 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 FOXM1Q08050 763 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 PDCD4Q53EL6 469 aaKnown RBP13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 MARC1Q5VT66 337 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 ANKRD34AQ69YU3 496 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 BTLAQ7Z6A9 289 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 STK32CQ86UX6 486 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 SFRP1Q8N474 314 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 PDZD8Q8NEN9 1154 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 OR13C4Q8NGS5 318 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 OR2T11Q8NH01 316 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 CHPT1Q8WUD6 406 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 PSMG2Q969U7 264 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 PPP1R2P1Q96PQ5 205 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 DGKBQ9Y6T7 804 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 MOXD2PA6NHM9 499 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 SOBPA7XYQ1 873 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 CFAP99D6REC4 459 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 UPK1AO00322 258 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 GLP2RO95838 553 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 BRCC3P46736 316 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 RENBPP51606 427 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 POLR2JP52435 117 aaKnown RBP13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 ARSFP54793 590 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 TMBIM6P55061 237 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 LCP2Q13094 533 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 SELPLGQ14242 412 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 IMPG1Q17R60 797 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 AAK1Q2M2I8 961 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 BRMS1LQ5PSV4 323 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 GLYATQ6IB77 296 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 UGT3A1Q6NUS8 523 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 PAQR3Q6TCH7 311 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 R3HCC1LQ7Z5L2 792 aaKnown RBP13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 PDPRQ8NCN5 879 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 BPIFB1Q8TDL5 484 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 TMBIM1Q969X1 311 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 ASB2Q96Q27 587 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 TSPAN18Q96SJ8 248 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 TUBA1CQ9BQE3 449 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 BDH2Q9BUT1 245 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 NMUR1Q9HB89 426 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 AIG1Q9NVV5 245 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 TMEM9Q9P0T7 183 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 ZNF225Q9UK10 706 aa13.99□□□□□ -0.17
CLCNKA-202ENST00000375692 CDC7O00311 574 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 THP07101 528 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 ATXN1LP0C7T5 689 aaKnown RBP13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 SCNN1GP51170 649 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 PRMT2P55345 433 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 MBTPS1Q14703 1052 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 TSNQ15631 228 aaKnown RBP13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 PIK3R6Q5UE93 754 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 PIWIL3Q7Z3Z3 882 aaKnown RBP13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 SCD5Q86SK9 330 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 SYVN1Q86TM6 617 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 IGFN1Q86VF2 1251 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 RIMKLAQ8IXN7 391 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 CLEC4FQ8N1N0 589 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 PGBD5Q8N414 524 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 FBXO39Q8N4B4 442 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 TMEM199Q8N511 208 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 OSCP1Q8WVF1 389 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 RSPH1Q8WYR4 309 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms