RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 RCBTB1Q8NDN9 531 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 SPATA22Q8NHS9 363 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 JPH3Q8WXH2 748 aaPredicted RBP12.06□□□□□ -0.48
LSM2-208ENST00000375661 ART4Q93070 314 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 COQ10AQ96MF6 247 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 SPATA13Q96N96 652 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 FCRL5Q96RD9 977 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 NAP1L3Q99457 506 aaPredicted RBP12.06□□□□□ -0.48
LSM2-208ENST00000375661 GORASP1Q9BQQ3 440 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 FRMD8Q9BZ67 464 aaPredicted RBP12.06□□□□□ -0.48
LSM2-208ENST00000375661 CARS2Q9HA77 564 aaKnown RBP12.06□□□□□ -0.48
LSM2-208ENST00000375661 HAUS2Q9NVX0 235 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 SLC39A1Q9NY26 324 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 ZNF148Q9UQR1 794 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 B3GALT1Q9Y5Z6 326 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 F5H423 210 aaPredicted RBP12.05□□□□□ -0.48
LSM2-208ENST00000375661 PSMD11O00231 422 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 RAD1O60671 282 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 SOCS5O75159 536 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 ZNF189O75820 626 aaPredicted RBP12.05□□□□□ -0.48
LSM2-208ENST00000375661 PGLSO95336 258 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 MT-CYBP00156 380 aaPredicted RBP12.05□□□□□ -0.48
LSM2-208ENST00000375661 PRLP01236 227 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 CEACAM5P06731 702 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 IVLP07476 585 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 PDHA1P08559 390 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 ETS1P14921 441 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 MAP4P27816 1152 aaKnown RBP12.05□□□□□ -0.48
LSM2-208ENST00000375661 GPLD1P80108 840 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 ACOX1Q15067 660 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 KCTD19Q17RG1 926 aaPredicted RBP12.05□□□□□ -0.48
LSM2-208ENST00000375661 SKIDA1Q1XH10 827 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 CRTC2Q53ET0 693 aaPredicted RBP12.05□□□□□ -0.48
LSM2-208ENST00000375661 TMEM71Q6P5X7 295 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 NAGSQ8N159 534 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 PAF1Q8N7H5 531 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 C9orf43Q8TAL5 461 aaPredicted RBP12.05□□□□□ -0.48
LSM2-208ENST00000375661 PIH1D2Q8WWB5 315 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 MAGOHBQ96A72 148 aaKnown RBP12.05□□□□□ -0.48
LSM2-208ENST00000375661 KIAA1143Q96AT1 154 aaPredicted RBP12.05□□□□□ -0.48
LSM2-208ENST00000375661 NUS1Q96E22 293 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 OXNAD1Q96HP4 312 aaPredicted RBP12.05□□□□□ -0.48
LSM2-208ENST00000375661 FERMT1Q9BQL6 677 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 ZPBPQ9BS86 351 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 MLPHQ9BV36 600 aaPredicted RBP12.05□□□□□ -0.48
LSM2-208ENST00000375661 TDRD1Q9BXT4 1180 aaKnown RBP12.05□□□□□ -0.48
LSM2-208ENST00000375661 HOMER3Q9NSC5 361 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 UBP1Q9NZI7 540 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 RSPH14Q9UHP6 348 aa12.05□□□□□ -0.48
LSM2-208ENST00000375661 IGHV1OR21-1A0A087WYE8 117 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 PHF2O75151 1096 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 METTL18O95568 372 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 TUBB4AP04350 444 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 ZSCAN5DPP0CG00 497 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 PSMB4P28070 264 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 COILP38432 576 aaPredicted RBP12.04□□□□□ -0.48
LSM2-208ENST00000375661 MC1RQ01726 317 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 SLC14A2Q15849 920 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 P3H1Q32P28 736 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 ARMC12Q5T9G4 340 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 ITPRIPL1Q6GPH6 555 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 KDELC1Q6UW63 502 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 HEATR4Q86WZ0 1026 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 KLHDC8BQ8IXV7 354 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 NLGN4XQ8N0W4 816 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 PELI3Q8N2H9 469 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 FAM26EQ8N5C1 309 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 NLGN4YQ8NFZ3 816 aaPredicted RBP12.04□□□□□ -0.48
LSM2-208ENST00000375661 PDCD6IPQ8WUM4 868 aaKnown RBP12.04□□□□□ -0.48
LSM2-208ENST00000375661 PMEPA1Q969W9 287 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 MRGPRX2Q96LB1 330 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 SMIM14Q96QK8 99 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 TRIB3Q96RU7 358 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 GBA3Q9H227 469 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 TRIT1Q9H3H1 467 aaKnown RBP12.04□□□□□ -0.48
LSM2-208ENST00000375661 GPN2Q9H9Y4 310 aaPredicted RBP12.04□□□□□ -0.48
LSM2-208ENST00000375661 PDP2Q9P2J9 529 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 RNF14Q9UBS8 474 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 B4GALT6Q9UBX8 382 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 FAM153AQ9UHL3 310 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 PILRAQ9UKJ1 303 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 PHTF1Q9UMS5 762 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 CHKBQ9Y259 395 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 SLC17A4Q9Y2C5 497 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 PPIL1Q9Y3C6 166 aa12.04□□□□□ -0.48
LSM2-208ENST00000375661 COL12A1Q99715 3063 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 KIF2AO00139 706 aaPredicted RBP12.03□□□□□ -0.48
LSM2-208ENST00000375661 PPM1DO15297 605 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 PMPCBO75439 489 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 STK10O94804 968 aaKnown RBP12.03□□□□□ -0.48
LSM2-208ENST00000375661 IFNB1P01574 187 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 FUCA1P04066 466 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 AK4P27144 223 aaPredicted RBP12.03□□□□□ -0.48
LSM2-208ENST00000375661 VIPR1P32241 457 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 CSF2RBP32927 897 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 RPL22P35268 128 aaKnown RBP12.03□□□□□ -0.48
LSM2-208ENST00000375661 DEKP35659 375 aaKnown RBP12.03□□□□□ -0.48
LSM2-208ENST00000375661 PAFAH1B1P43034 410 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 GNPDA1P46926 289 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 FASLGP48023 281 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms