RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 FAM210AQ96ND0 272 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 WDR12Q9GZL7 423 aaKnown RBP6.49□□□□□ -1.37
SMC1A-202ENST00000375340 XYLT2Q9H1B5 865 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 SUCOQ9UBS9 1254 aaKnown RBP6.49□□□□□ -1.37
SMC1A-202ENST00000375340 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.49□□□□□ -1.371e-6■□□□□ 11.3
SMC1A-202ENST00000375340 GIT1Q9Y2X7 761 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 STYXL1Q9Y6J8 313 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 SQORQ9Y6N5 450 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 PHIPQ8WWQ0 1821 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 ENPP3O14638 875 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 URODP06132 367 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 SLC7A1P30825 629 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 AGTR2P50052 363 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 ARHGAP1Q07960 439 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 C1DQ13901 141 aaKnown RBP6.49□□□□□ -1.37
SMC1A-202ENST00000375340 TTC23Q5W5X9 447 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 TIFABQ6ZNK6 161 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 C15orf39Q6ZRI6 1047 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 PLEKHM3Q6ZWE6 761 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 PIH1D2Q8WWB5 315 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 MRPS31Q92665 395 aaKnown RBP6.49□□□□□ -1.37
SMC1A-202ENST00000375340 PROX1Q92786 737 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 GLT1D1Q96MS3 346 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 LRTM1Q9HBL6 345 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 POLE4Q9NR33 117 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 CLN6Q9NWW5 311 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 C3orf18Q9UK00 162 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 CYP7B1O75881 506 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 CAPN1P07384 714 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 CDC42P60953 191 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 DUSP4Q13115 394 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 ALFQ53S48 1182 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 RTL3Q8N8U3 475 aaKnown RBP6.49□□□□□ -1.37
SMC1A-202ENST00000375340 NLGN2Q8NFZ4 835 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 LRRC58Q96CX6 371 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 KCNC2Q96PR1 638 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 GTF2A1LQ9UNN4 478 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 PCDHB9Q9Y5E1 797 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 BCAS2O75934 225 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-202ENST00000375340 ACSM2AQ08AH3 577 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 TRAP1Q12931 704 aaKnown RBP6.48□□□□□ -1.37
SMC1A-202ENST00000375340 TP53BP2Q13625 1128 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 ZSWIM7Q19AV6 140 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 METTL21CQ5VZV1 264 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 ACSM2BQ68CK6 577 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 GATAD2AQ86YP4 633 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 ARL10Q8N8L6 244 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 BTN2A2Q8WVV5 523 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 S100ZQ8WXG8 99 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 APOLD1Q96LR9 279 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 CHID1Q9BWS9 393 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 MAP4K5Q9Y4K4 846 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 PCDHGC4Q9Y5F7 938 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 LYVE1Q9Y5Y7 322 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 CCDC182A6NF36 153 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 POU2F1P14859 743 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 TACR2P21452 398 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 LAPTM4AQ15012 233 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 PHKG1Q16816 387 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 FAM174BQ3ZCQ3 159 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 NUAK2Q9H093 628 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 SLC25A51Q9H1U9 297 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 SERHL2Q9H4I8 314 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 SGK2Q9HBY8 427 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 SERHLQ9NQF3 203 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 SLC22A2O15244 555 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 IQCF3P0C7M6 154 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 IL12AP29459 219 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 ZNF280AP59817 542 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-202ENST00000375340 CYP4F8P98187 520 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 PPP1R8Q12972 351 aaKnown RBP6.48□□□□□ -1.37
SMC1A-202ENST00000375340 HECTD3Q5T447 861 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 CAMKK1Q8N5S9 505 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 ISOC1Q96CN7 298 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 NSUN5Q96P11 429 aaKnown RBP6.48□□□□□ -1.37
SMC1A-202ENST00000375340 TRIM39Q9HCM9 518 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 TXNRD2Q9NNW7 524 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 KRCC1Q9NPI7 259 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-202ENST00000375340 DNAJB4Q9UDY4 337 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 PIPSLA2A3N6 862 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 SNNO75324 88 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-202ENST00000375340 IMPDH1P20839 514 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 CORO1AP31146 461 aaKnown RBP6.48□□□□□ -1.37
SMC1A-202ENST00000375340 MAGEA10P43363 369 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-202ENST00000375340 DNASE1L3Q13609 305 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 PTCHD4Q6ZW05 846 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 VN1R5Q7Z5H4 357 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 TRIM74Q86UV6 250 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 TRIM73Q86UV7 250 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 TMBIM1Q969X1 311 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 DMRTB1Q96MA1 342 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 NUDT4Q9NZJ9 180 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 ZNF624Q9P2J8 865 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-202ENST00000375340 KANSL3Q9P2N6 904 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 FER1L6Q2WGJ9 1857 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 BTBD19C9JJ37 291 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 TFECO14948 347 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-202ENST00000375340 SUV39H1O43463 412 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 TLR5O60602 858 aa6.48□□□□□ -1.37
SMC1A-202ENST00000375340 KPNA6O60684 536 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms