RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 NOL6Q9H6R4 1146 aaKnown RBP20.96■□□□□ 0.95
UPF3A-202ENST00000375299 RNF112Q9ULX5 631 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 ANKRD12Q6UB98 2062 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 HTR3EA5X5Y0 456 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 CD3EAPO15446 510 aaKnown RBP20.95■□□□□ 0.94
UPF3A-202ENST00000375299 RPS17P08708 135 aaKnown RBP20.95■□□□□ 0.94
UPF3A-202ENST00000375299 HOXD12P35452 270 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 SEMA3AQ14563 771 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 TWF2Q6IBS0 349 aaKnown RBP20.95■□□□□ 0.94
UPF3A-202ENST00000375299 SLC2A7Q6PXP3 512 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 FRA10AC1Q70Z53 315 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 EFL1Q7Z2Z2 1120 aaKnown RBP20.95■□□□□ 0.94
UPF3A-202ENST00000375299 BTLAQ7Z6A9 289 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 RALGPS2Q86X27 583 aaPredicted RBP20.95■□□□□ 0.94
UPF3A-202ENST00000375299 DTWD1Q8N5C7 304 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 ITFG1Q8TB96 612 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 STAG3L4Q8TBR4 150 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 MUL1Q969V5 352 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 KIAA1191Q96A73 305 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 KLHL5Q96PQ7 755 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 ENPP5Q9UJA9 477 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 PDE10AQ9Y233 779 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 PCDHGA8Q9Y5G5 932 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 CNOT3O75175 753 aaKnown RBP20.95■□□□□ 0.94
UPF3A-202ENST00000375299 MOCS2O96007 188 aaPredicted RBP20.95■□□□□ 0.94
UPF3A-202ENST00000375299 ANXA6P08133 673 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 HTR1AP08908 422 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 PCSK1P29120 753 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 CLCNKBP51801 687 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 TPD52P55327 224 aaPredicted RBP20.95■□□□□ 0.94
UPF3A-202ENST00000375299 ERVK-8P63133 956 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 ACVR1Q04771 509 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 SLC10A7Q0GE19 358 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 IMPG1Q17R60 797 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 FAM98BQ52LJ0 330 aaKnown RBP20.95■□□□□ 0.94
UPF3A-202ENST00000375299 FBXO48Q5FWF7 155 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 C6orf141Q5SZD1 244 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 MRNIPQ6NTE8 343 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 CHDHQ8NE62 594 aaPredicted RBP20.95■□□□□ 0.94
UPF3A-202ENST00000375299 GPR150Q8NGU9 434 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 CASP10Q92851 521 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 SLC10A4Q96EP9 437 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 AARSD1Q9BTE6 412 aaKnown RBP20.95■□□□□ 0.94
UPF3A-202ENST00000375299 WDR12Q9GZL7 423 aaKnown RBP20.95■□□□□ 0.94
UPF3A-202ENST00000375299 ABHD16BQ9H3Z7 469 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 HMG20AQ9NP66 347 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 SLC27A5Q9Y2P5 690 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 HS3ST4Q9Y661 456 aa20.95■□□□□ 0.94
UPF3A-202ENST00000375299 J3KR12 359 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 CNTN5O94779 1100 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 CHEK2O96017 543 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 ATXN1LP0C7T5 689 aaKnown RBP20.94■□□□□ 0.94
UPF3A-202ENST00000375299 PCNAP12004 261 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 HTR1BP28222 390 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 PRDX3P30048 256 aaKnown RBP20.94■□□□□ 0.94
UPF3A-202ENST00000375299 MTHFRP42898 656 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 RAD23AP54725 363 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 CD300CQ08708 224 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 MARC1Q5VT66 337 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 IQSEC1Q6DN90 963 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 SYVN1Q86TM6 617 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 ZFAND4Q86XD8 727 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 C3orf58Q8NDZ4 430 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 SDCCAG3Q96C92 435 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 CCDC138Q96M89 665 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 DGCR6LQ9BY27 220 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 SMOC2Q9H3U7 446 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 FAM118AQ9NWS6 357 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 GRXCR2A6NFK2 248 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 WASH4PA8MWX3 477 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 TBC1D4O60343 1298 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 UROSP10746 265 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 NR4A1P22736 598 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 CHRNB3Q05901 458 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 EPS8Q12929 822 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 TRIM32Q13049 653 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 SCIMPQ6UWF3 145 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 GPR142Q7Z601 462 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 ZDHHC13Q8IUH4 622 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 DPP10Q8N608 796 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 OR2T11Q8NH01 316 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 SCAMP5Q8TAC9 235 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 MBOAT4Q96T53 435 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 HEPHQ9BQS7 1158 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 TINF2Q9BSI4 451 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 FEM1AQ9BSK4 669 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 ABCC13Q9NSE7 274 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 UXTQ9UBK9 157 aaPredicted RBP20.94■□□□□ 0.94
UPF3A-202ENST00000375299 BAG5Q9UL15 447 aa20.94■□□□□ 0.94
UPF3A-202ENST00000375299 FAM32AQ9Y421 112 aaKnown RBP20.94■□□□□ 0.94
UPF3A-202ENST00000375299 UGT2B4P06133 528 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 HPCAL1P37235 193 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 YWHAHQ04917 246 aaPredicted RBP20.93■□□□□ 0.94
UPF3A-202ENST00000375299 SELPLGQ14242 412 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 MEP1AQ16819 746 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 PRR23BQ6ZRT6 265 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 PIWIL3Q7Z3Z3 882 aaKnown RBP20.93■□□□□ 0.94
UPF3A-202ENST00000375299 ZNF555Q8NEP9 628 aa20.93■□□□□ 0.94
UPF3A-202ENST00000375299 ZNF641Q96N77 438 aaPredicted RBP20.93■□□□□ 0.94
UPF3A-202ENST00000375299 RTP3Q9BQQ7 232 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms