RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 TTC25Q96NG3 672 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 TCF12Q99081 682 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 TRIM56Q9BRZ2 755 aaKnown RBP11.23□□□□□ -0.61
HSPG2-202ENST00000374676 TSPYL1Q9H0U9 437 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 CARS2Q9HA77 564 aaKnown RBP11.23□□□□□ -0.61
HSPG2-202ENST00000374676 ARFGAP3Q9NP61 516 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 CATSPERZQ9NTU4 200 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 APOBEC3BQ9UH17 382 aaKnown RBP11.23□□□□□ -0.61
HSPG2-202ENST00000374676 MOSPD1Q9UJG1 213 aa11.23□□□□□ -0.61
HSPG2-202ENST00000374676 DNMT3AQ9Y6K1 912 aaPredicted RBP11.23□□□□□ -0.61
HSPG2-202ENST00000374676 NEMP2A6NFY4 417 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 LMO7DNF2Z398 122 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 SCAMP1O15126 338 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 KMOO15229 486 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 AQP9O43315 295 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 GRID2O43424 1007 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 KCNJ13O60928 360 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 RHOXF2BP0C7M4 288 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 PRSS56P0CW18 603 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 CD59P13987 128 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 GNPDA1P46926 289 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 TTPAP49638 278 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 B4GALNT1Q00973 533 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 LRP8Q14114 963 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 CRYMQ14894 314 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 ELOCQ15369 112 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 DBN1Q16643 649 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 PRRT3Q5FWE3 981 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 MRNIPQ6NTE8 343 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 LVRNQ6Q4G3 990 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 TMEM220Q6QAJ8 160 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 UNC5AQ6ZN44 842 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 MICALCLQ6ZW33 695 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 MARK2Q7KZI7 788 aaKnown RBP11.22□□□□□ -0.61
HSPG2-202ENST00000374676 SDCCAG8Q86SQ7 713 aaPredicted RBP11.22□□□□□ -0.61
HSPG2-202ENST00000374676 LRRTM4Q86VH4 590 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 GALNT13Q8IUC8 556 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 ANKMY2Q8IV38 441 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 ZBED8Q8IZ13 594 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 RASGEF1AQ8N9B8 481 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
HSPG2-202ENST00000374676 FBXO36Q8NEA4 188 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 ZNF548Q8NEK5 533 aaPredicted RBP11.22□□□□□ -0.61
HSPG2-202ENST00000374676 CALML6Q8TD86 181 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 NETO1Q8TDF5 533 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 GPBAR1Q8TDU6 330 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 PYROXD1Q8WU10 500 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 IFT81Q8WYA0 676 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 DCUN1D1Q96GG9 259 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 OR2M4Q96R27 311 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 RHOXF2Q9BQY4 288 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 WDR83Q9BRX9 315 aaKnown RBP11.22□□□□□ -0.61
HSPG2-202ENST00000374676 LRRC61Q9BV99 259 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 CLPBQ9H078 707 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 TMEM168Q9H0V1 697 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 PLAC1Q9HBJ0 212 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 SAYSD1Q9NPB0 183 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 MTRF1LQ9UGC7 380 aaKnown RBP11.22□□□□□ -0.61
HSPG2-202ENST00000374676 ZNHIT2Q9UHR6 403 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 CHMP2BQ9UQN3 213 aa11.22□□□□□ -0.61
HSPG2-202ENST00000374676 ASXL3Q9C0F0 2248 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.21□□□□□ -0.61
HSPG2-202ENST00000374676 TPP1O14773 563 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 PFDN6O15212 129 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 FLRT2O43155 660 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 AP2A2O94973 939 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 GIMD1P0DJR0 217 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 ATP1B2P14415 290 aaPredicted RBP11.21□□□□□ -0.61
HSPG2-202ENST00000374676 OGNP20774 298 aaKnown RBP11.21□□□□□ -0.61
HSPG2-202ENST00000374676 ECHS1P30084 290 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 AKT1P31749 480 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 NSG1P42857 185 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 MAGEA4P43358 317 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 CARSP49589 748 aaKnown RBP11.21□□□□□ -0.61
HSPG2-202ENST00000374676 CLCNKAP51800 687 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 CTSCP53634 463 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 IL9RQ01113 521 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 CTBSQ01459 385 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 THOC5Q13769 683 aaKnown RBP11.21□□□□□ -0.61
HSPG2-202ENST00000374676 SEMA3AQ14563 771 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 FASTKD3Q14CZ7 662 aaKnown RBP11.21□□□□□ -0.61
HSPG2-202ENST00000374676 UAP1L1Q3KQV9 507 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 BCL7AQ4VC05 210 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 HP1BP3Q5SSJ5 553 aaPredicted RBP11.21□□□□□ -0.61
HSPG2-202ENST00000374676 TEX35Q5T0J7 233 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 PACS1Q6VY07 963 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 CYS1Q717R9 158 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 C11orf96Q7Z7L8 435 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 GKN2Q86XP6 184 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 GATAD2AQ86YP4 633 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 RELL1Q8IUW5 271 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 ZNF547Q8IVP9 402 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 EIF1ADQ8N9N8 165 aaKnown RBP11.21□□□□□ -0.61
HSPG2-202ENST00000374676 GABPB2Q8TAK5 448 aaPredicted RBP11.21□□□□□ -0.61
HSPG2-202ENST00000374676 LMX1AQ8TE12 382 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 SGF29Q96ES7 293 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 TIMM29Q9BSF4 260 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 GSDMCQ9BYG8 508 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 CAAP1Q9H8G2 361 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 C20orf96Q9NUD7 363 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms