RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 SUZ12Q15022 739 aaKnown RBP14.83□□□□□ -0.04
HSPG2-201ENST00000374673 LONRF1Q17RB8 773 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 PRRT3Q5FWE3 981 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 HP1BP3Q5SSJ5 553 aaPredicted RBP14.83□□□□□ -0.04
HSPG2-201ENST00000374673 STEAP4Q687X5 459 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 PACS1Q6VY07 963 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 UNC5AQ6ZN44 842 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 GALNT13Q8IUC8 556 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 ANKMY2Q8IV38 441 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 LMNTD2Q8IXW0 634 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 IFT20Q8IY31 132 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 SDR16C5Q8N3Y7 309 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 RASGEF1AQ8N9B8 481 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 GPR150Q8NGU9 434 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 DCUN1D1Q96GG9 259 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 TTC1Q99614 292 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 TMEM168Q9H0V1 697 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 PLAC1Q9HBJ0 212 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 SAYSD1Q9NPB0 183 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 MTRF1LQ9UGC7 380 aaKnown RBP14.83□□□□□ -0.04
HSPG2-201ENST00000374673 GPR34Q9UPC5 381 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 PCYT1BQ9Y5K3 369 aaPredicted RBP14.83□□□□□ -0.04
HSPG2-201ENST00000374673 FAM186AA6NE01 2351 aa14.83□□□□□ -0.04
HSPG2-201ENST00000374673 COL5A1P20908 1838 aaPredicted RBP14.82□□□□□ -0.04
HSPG2-201ENST00000374673 PIKFYVEQ9Y2I7 2098 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 FLRT2O43155 660 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 CD59P13987 128 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 ATP1B2P14415 290 aaPredicted RBP14.82□□□□□ -0.04
HSPG2-201ENST00000374673 NSG1P42857 185 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 CARSP49589 748 aaKnown RBP14.82□□□□□ -0.04
HSPG2-201ENST00000374673 TTPAP49638 278 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 LRP8Q14114 963 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 FRG1Q14331 258 aaKnown RBP14.82□□□□□ -0.04
HSPG2-201ENST00000374673 HLTFQ14527 1009 aaKnown RBP eCLIP14.82□□□□□ -0.04
HSPG2-201ENST00000374673 ELOCQ15369 112 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 TYSND1Q2T9J0 566 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 MRNIPQ6NTE8 343 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 LRRTM4Q86VH4 590 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 GATAD2AQ86YP4 633 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 SLC25A45Q8N413 288 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 GPBAR1Q8TDU6 330 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 LMX1AQ8TE12 382 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 PYROXD1Q8WU10 500 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 SCG3Q8WXD2 468 aaKnown RBP14.82□□□□□ -0.04
HSPG2-201ENST00000374673 IFT81Q8WYA0 676 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 CCDC97Q96F63 343 aaPredicted RBP14.82□□□□□ -0.04
HSPG2-201ENST00000374673 CFAP36Q96G28 342 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 ZNF514Q96K75 400 aaPredicted RBP14.82□□□□□ -0.04
HSPG2-201ENST00000374673 BOCQ9BWV1 1114 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 CLPBQ9H078 707 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 C20orf96Q9NUD7 363 aaPredicted RBP14.82□□□□□ -0.04
HSPG2-201ENST00000374673 UCKL1Q9NWZ5 548 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 MARCH4Q9P2E8 410 aaPredicted RBP14.82□□□□□ -0.04
HSPG2-201ENST00000374673 ZNHIT2Q9UHR6 403 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 GPSM3Q9Y4H4 160 aa14.82□□□□□ -0.04
HSPG2-201ENST00000374673 EP300Q09472 2414 aaPredicted RBP14.81□□□□□ -0.04
HSPG2-201ENST00000374673 NEMP2A6NFY4 417 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 GOLGA8KD6RF30 607 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 GOLGA8TH3BQL2 631 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 TPP1O14773 563 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 SCAMP1O15126 338 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 KMOO15229 486 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 SGTAO43765 313 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 GIMD1P0DJR0 217 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 PRLHRP49683 370 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 CTSCP53634 463 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 ILF3Q12906 894 aaKnown RBP eCLIP14.81□□□□□ -0.04
HSPG2-201ENST00000374673 C1orf61Q13536 156 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 THOC5Q13769 683 aaKnown RBP14.81□□□□□ -0.04
HSPG2-201ENST00000374673 INAVAQ3KP66 663 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 UAP1L1Q3KQV9 507 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 BCL7AQ4VC05 210 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 NEPROQ6NW34 567 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 TMEM220Q6QAJ8 160 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 CRTC3Q6UUV7 619 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 CEP128Q6ZU80 1094 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 C11orf96Q7Z7L8 435 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 SDCCAG8Q86SQ7 713 aaPredicted RBP14.81□□□□□ -0.04
HSPG2-201ENST00000374673 KCNMB4Q86W47 210 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 GKN2Q86XP6 184 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 ZNF547Q8IVP9 402 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 GSDMBQ8TAX9 411 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 CALML6Q8TD86 181 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 CERS2Q96G23 380 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 FMO2Q99518 471 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 TIMM29Q9BSF4 260 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 FAM167BQ9BTA0 163 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 GSDMCQ9BYG8 508 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 TSPYL1Q9H0U9 437 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 IL1RAPL1Q9NZN1 696 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 DNMT3AQ9Y6K1 912 aaPredicted RBP14.81□□□□□ -0.04
HSPG2-201ENST00000374673 ASCC3Q8N3C0 2202 aaKnown RBP14.81□□□□□ -0.04
HSPG2-201ENST00000374673 CABIN1Q9Y6J0 2220 aa14.81□□□□□ -0.04
HSPG2-201ENST00000374673 OR2AG2A6NM03 316 aa14.8□□□□□ -0.04
HSPG2-201ENST00000374673 LMO7DNF2Z398 122 aa14.8□□□□□ -0.04
HSPG2-201ENST00000374673 QSOX1O00391 747 aa14.8□□□□□ -0.04
HSPG2-201ENST00000374673 KCNJ13O60928 360 aa14.8□□□□□ -0.04
HSPG2-201ENST00000374673 AP2A2O94973 939 aa14.8□□□□□ -0.04
HSPG2-201ENST00000374673 CELA2BP08218 269 aaPredicted RBP14.8□□□□□ -0.04
HSPG2-201ENST00000374673 GSTA2P09210 222 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms