RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 GDAP2Q9NXN4 497 aa17.27■□□□□ 0.35
PTPRU-202ENST00000373779 COQ6Q9Y2Z9 468 aa17.27■□□□□ 0.35
PTPRU-202ENST00000373779 ERVK-8P63133 956 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 PRKCQQ04759 706 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 SLC10A2Q12908 348 aaPredicted RBP17.26■□□□□ 0.35
PTPRU-202ENST00000373779 DENND5AQ6IQ26 1287 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 ERMP1Q7Z2K6 904 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 ZBTB2Q8N680 514 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 ESAMQ96AP7 390 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.26■□□□□ 0.35
PTPRU-202ENST00000373779 CAPN15O75808 1086 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 ANXA8L1Q5VT79 327 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 ZNF57Q68EA5 555 aaPredicted RBP17.26■□□□□ 0.35
PTPRU-202ENST00000373779 ERICH5Q6P6B1 374 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 CERS6Q6ZMG9 384 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 APOLD1Q96LR9 279 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 RAPGEFL1Q9UHV5 662 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 TDRKHQ9Y2W6 561 aaKnown RBP17.26■□□□□ 0.35
PTPRU-202ENST00000373779 TELO2Q9Y4R8 837 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 KAT6AQ92794 2004 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 ETV4P43268 484 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 KIR3DL1P43629 444 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 GNA12Q03113 381 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 CYP2A13Q16696 494 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 STEAP4Q687X5 459 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 EPHX4Q8IUS5 362 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 CPNE9Q8IYJ1 553 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 KLHL23Q8NBE8 558 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 SPPL2BQ8TCT7 592 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 RNFT2Q96EX2 444 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 NLNQ9BYT8 704 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 ZFYVE1Q9HBF4 777 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 ERGIC3Q9Y282 383 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 CCDC162PA2VCL2 907 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 FABP3P05413 133 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 TUBA4AP68366 448 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 P2RY8Q86VZ1 359 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 OR9I1Q8NGQ6 314 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 GMLQ99445 158 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 DNAJB9Q9UBS3 223 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 CXCR6O00574 342 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 SERPINI2O75830 405 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 CBX3Q13185 183 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 DEFB128Q7Z7B8 93 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 LIX1Q8N485 282 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 PDLIM7Q9NR12 457 aa17.26■□□□□ 0.35
PTPRU-202ENST00000373779 INSIG1O15503 277 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 STK16O75716 305 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 CDH1P12830 882 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 RPL3P39023 403 aaKnown RBP17.25■□□□□ 0.35
PTPRU-202ENST00000373779 NIPAL4Q0D2K0 466 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 AKAP14Q86UN6 197 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 OR6K2Q8NGY2 324 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 SLC13A3Q8WWT9 602 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 PADI3Q9ULW8 664 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 TAF4O00268 1085 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 GCAP28676 217 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 MARVELD2Q8N4S9 558 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 OR7D4Q8NG98 312 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 FEM1CQ96JP0 617 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 OGDHLQ9ULD0 1010 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 COL2A1P02458 1487 aaPredicted RBP17.25■□□□□ 0.35
PTPRU-202ENST00000373779 USP54Q70EL1 1684 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 CLDN9O95484 217 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 DAG1Q14118 895 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 OSTM1Q86WC4 334 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 GRIN3AQ8TCU5 1115 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 MAGEH1Q9H213 219 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 SERHL2Q9H4I8 314 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 BRD9Q9H8M2 597 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 SERHLQ9NQF3 203 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 FKBPLQ9UIM3 349 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 MYH4Q9Y623 1939 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 IFNGR2P38484 337 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 FOXM1Q08050 763 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 MED22Q15528 200 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 FAM110CQ1W6H9 321 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 ATG14Q6ZNE5 492 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 YTHDF1Q9BYJ9 559 aaKnown RBP17.25■□□□□ 0.35
PTPRU-202ENST00000373779 TRMT13Q9NUP7 481 aaKnown RBP17.25■□□□□ 0.35
PTPRU-202ENST00000373779 KCTD5Q9NXV2 234 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 TUBA8Q9NY65 449 aaPredicted RBP17.25■□□□□ 0.35
PTPRU-202ENST00000373779 GSTK1Q9Y2Q3 226 aa17.25■□□□□ 0.35
PTPRU-202ENST00000373779 BHMG1C9JSJ3 638 aaPredicted RBP17.24■□□□□ 0.35
PTPRU-202ENST00000373779 NOBOXO60393 691 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 NDUFS2O75306 463 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 RAB15P59190 212 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 DNAJB13P59910 316 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 SMAD3P84022 425 aaKnown RBP17.24■□□□□ 0.35
PTPRU-202ENST00000373779 SETMARQ53H47 684 aaPredicted RBP17.24■□□□□ 0.35
PTPRU-202ENST00000373779 METTL3Q86U44 580 aaKnown RBP17.24■□□□□ 0.35
PTPRU-202ENST00000373779 DHRS4Q9BTZ2 278 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 ACTR3BQ9P1U1 418 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 GLYATL1P3A0A0U1RQE8 302 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 IDH3BO43837 385 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 OR6B1O95007 311 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 PABPC4LP0CB38 370 aaKnown RBP17.24■□□□□ 0.35
PTPRU-202ENST00000373779 COX10Q12887 443 aa17.24■□□□□ 0.35
PTPRU-202ENST00000373779 DUSP4Q13115 394 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms