RNA–Protein interactions for RNA: ENST00000373668.7

COL16A1-202, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL16A1, Length 3,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-202ENST00000373668 GAB3Q8WWW8 586 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 SLC29A1Q99808 456 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 MRPL46Q9H2W6 279 aaKnown RBP13.7□□□□□ -0.22
COL16A1-202ENST00000373668 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.7□□□□□ -0.22
COL16A1-202ENST00000373668 CLDND1Q9NY35 253 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 VPS51Q9UID3 782 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 RIMS3Q9UJD0 308 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 KATNA1O75449 491 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 CTSAP10619 480 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 ARSAP15289 507 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 CDKN1CP49918 316 aaPredicted RBP13.7□□□□□ -0.22
COL16A1-202ENST00000373668 CDH4P55283 916 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 HSPA14Q0VDF9 509 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 CBX3Q13185 183 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 RAB33AQ14088 237 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 MRNIPQ6NTE8 343 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 SERPINA13PQ6UXR4 307 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 ZYG11AQ6WRX3 759 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 PCYOX1LQ8NBM8 494 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 CDK5RAP1Q96SZ6 601 aaKnown RBP13.7□□□□□ -0.22
COL16A1-202ENST00000373668 SEPHS2Q99611 448 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 ZNF696Q9H7X3 374 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 SPAG4Q9NPE6 437 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 GVINP1Q7Z2Y8 2422 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 ANK1P16157 1881 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 ALDH1A2O94788 518 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 FAM163BP0C2L3 166 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 SLC1A2P43004 574 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 SMARCB1Q12824 385 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 TRAF2Q12933 501 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 CHPFQ8IZ52 775 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 CANT1Q8WVQ1 401 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.7□□□□□ -0.22
COL16A1-202ENST00000373668 C11orf84Q9BUA3 381 aaPredicted RBP13.7□□□□□ -0.22
COL16A1-202ENST00000373668 ADGRE3Q9BY15 652 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 EML4Q9HC35 981 aaKnown RBP13.7□□□□□ -0.22
COL16A1-202ENST00000373668 IGSF9Q9P2J2 1179 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 SLC25A13Q9UJS0 675 aa13.7□□□□□ -0.22
COL16A1-202ENST00000373668 H3BQ06 376 aaPredicted RBP13.69□□□□□ -0.22
COL16A1-202ENST00000373668 ZNF195O14628 629 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 DLX3O60479 287 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 PCDH8O95206 1070 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 SNRPB2P08579 225 aaKnown RBP13.69□□□□□ -0.22
COL16A1-202ENST00000373668 BMP1P13497 986 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 TYRP14679 529 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 MC4RP32245 332 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 C21orf59P57076 290 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 SERINC3Q13530 473 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 PLCL1Q15111 1095 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 STEAP4Q687X5 459 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 XKR5Q6UX68 686 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 VPS50Q96JG6 964 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 MRGPRX2Q96LB1 330 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 ZBTB26Q9HCK0 441 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 TMEM189-UBE2V1I3L0A0 370 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 PSMD3O43242 534 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 TPD52L2O43399 206 aaKnown RBP13.69□□□□□ -0.22
COL16A1-202ENST00000373668 EFCAB14O75071 495 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 VNN2O95498 520 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 OCM2P0CE71 109 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 OCMP0CE72 109 aaPredicted RBP13.69□□□□□ -0.22
COL16A1-202ENST00000373668 CCR2P41597 374 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 MAGEA6P43360 314 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 RPL26P61254 145 aaKnown RBP13.69□□□□□ -0.22
COL16A1-202ENST00000373668 SAMD4BQ5PRF9 694 aaKnown RBP13.69□□□□□ -0.22
COL16A1-202ENST00000373668 ARMCX6Q7L4S7 300 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 ERI1Q8IV48 349 aaKnown RBP13.69□□□□□ -0.22
COL16A1-202ENST00000373668 PLEKHG4BQ96PX9 1271 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 YIPF2Q9BWQ6 316 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 DYRK4Q9NR20 520 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 CD274Q9NZQ7 290 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 CCDC162PA2VCL2 907 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 C7orf72A4D263 438 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 SNX2O60749 519 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 GOT2P00505 430 aaKnown RBP13.69□□□□□ -0.22
COL16A1-202ENST00000373668 HMOX2P30519 316 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 MAGEA3P43357 314 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 FAM219BQ5XKK7 198 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 CLEC6AQ6EIG7 209 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 CHST9Q7L1S5 443 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 RD3Q7Z3Z2 195 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 SPPL2CQ8IUH8 684 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 ZSWIM3Q96MP5 696 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 CCDC90BQ9GZT6 254 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 DUS2Q9NX74 493 aaKnown RBP13.69□□□□□ -0.22
COL16A1-202ENST00000373668 PKD2L2Q9NZM6 624 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 HSFX1Q9UBD0 423 aa13.69□□□□□ -0.22
COL16A1-202ENST00000373668 LINC01553A4QN01 128 aa13.68□□□□□ -0.22
COL16A1-202ENST00000373668 PRAMEF12O95522 483 aa13.68□□□□□ -0.22
COL16A1-202ENST00000373668 ZNF23P17027 643 aa13.68□□□□□ -0.22
COL16A1-202ENST00000373668 PSMA4P25789 261 aaKnown RBP13.68□□□□□ -0.22
COL16A1-202ENST00000373668 PFKFB4Q16877 469 aa13.68□□□□□ -0.22
COL16A1-202ENST00000373668 ZIK1Q3SY52 487 aaPredicted RBP13.68□□□□□ -0.22
COL16A1-202ENST00000373668 PARP15Q460N3 678 aa13.68□□□□□ -0.22
COL16A1-202ENST00000373668 MRPL43Q8N983 215 aaKnown RBP13.68□□□□□ -0.22
COL16A1-202ENST00000373668 MAGEE2Q8TD90 523 aaPredicted RBP13.68□□□□□ -0.22
COL16A1-202ENST00000373668 FEM1AQ9BSK4 669 aa13.68□□□□□ -0.22
COL16A1-202ENST00000373668 TRIM15Q9C019 465 aa13.68□□□□□ -0.22
COL16A1-202ENST00000373668 RHOJQ9H4E5 214 aa13.68□□□□□ -0.22
COL16A1-202ENST00000373668 EPB41L1Q9H4G0 881 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms