RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 CHDHQ8NE62 594 aaPredicted RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 OR2T11Q8NH01 316 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 ADAMTS16Q8TE57 1224 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 TWIST2Q8WVJ9 160 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 FIG4Q92562 907 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 LPAR1Q92633 364 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 PYCR2Q96C36 320 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 AURKBQ96GD4 344 aaPredicted RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 C12orf42Q96LP6 360 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 CCDC138Q96M89 665 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 MBOAT4Q96T53 435 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 C9orf16Q9BUW7 83 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 TEX13BQ9BXU2 312 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 BEX2Q9BXY8 128 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 MROQ9BYG7 248 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 ULBP1Q9BZM6 244 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 IKZF5Q9H5V7 419 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 MYOZ2Q9NPC6 264 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 RASSF1Q9NS23 344 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 SARDHQ9UL12 918 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 NDUFAF1Q9Y375 327 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 MAP4K5Q9Y4K4 846 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 SPO11Q9Y5K1 396 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 TANC1Q9C0D5 1861 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 COL11A1P12107 1806 aaPredicted RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 HTTP42858 3142 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ANKRD34BA5PLL1 514 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 M0R129 80 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 PFDN6O15212 129 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 MTRF1O75570 445 aaKnown RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 CPNE6O95741 557 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 DLGAP3O95886 979 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 LCKP06239 509 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 IDO1P14902 403 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 FOSL1P15407 271 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 PSMB9P28065 219 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 FMO4P31512 558 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ADRA1BP35368 520 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 MTHFRP42898 656 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ZFP36L2P47974 494 aaKnown RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 TKTL1P51854 596 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 HK2P52789 917 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ARSFP54793 590 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 STX1BP61266 288 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 EMX1Q04741 257 aaPredicted RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ITKQ08881 620 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 GRM1Q13255 1194 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 INPP5AQ14642 412 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 SLC25A52Q3SY17 297 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF678Q5SXM1 525 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 LCE2AQ5TA79 106 aaPredicted RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 FAM45BPQ6NSW5 357 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 PKN3Q6P5Z2 889 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 Q6ZPB1 254 aaPredicted RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 PAQR9Q6ZVX9 377 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 USP51Q70EK9 711 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 STRADAQ7RTN6 431 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 PIWIL4Q7Z3Z4 852 aaKnown RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ZCCHC7Q8N3Z6 543 aaKnown RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 DTWD1Q8N5C7 304 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 PDPRQ8NCN5 879 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 FAM45AQ8TCE6 357 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF347Q96SE7 839 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 CENPOQ9BU64 300 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 BTBD2Q9BX70 525 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 PRRG3Q9BZD7 231 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 DNAI2Q9GZS0 605 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 RNF38Q9H0F5 515 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 TKTL2Q9H0I9 626 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ADAMTS10Q9H324 1103 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ZBTB20Q9HC78 741 aaPredicted RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 VTA1Q9NP79 307 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 AKIP1Q9NQ31 210 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 SLC52A3Q9NQ40 469 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 EIF2B3Q9NR50 452 aaKnown RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 OR12D3Q9UGF7 316 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ANAPC2Q9UJX6 822 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 FAM50BQ9Y247 325 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 TNFSF13BQ9Y275 285 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ATP11BQ9Y2G3 1177 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 PCDHA9Q9Y5H5 950 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 DNMT3AQ9Y6K1 912 aaPredicted RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ANK1P16157 1881 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 H0YJX3 145 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 KPNA4O00629 521 aaPredicted RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 HS6ST1O60243 411 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 TSPAN1O60635 241 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 SNX2O60749 519 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 H2AFYO75367 372 aaKnown RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 CYP7B1O75881 506 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 FTH1P02794 183 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 HLA-DQB2P05538 268 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 CD6P30203 668 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 CYP2C18P33260 490 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 PSMD8P48556 350 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 DGKEP52429 567 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 ATP6V0D1P61421 351 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 BST2Q10589 180 aaKnown RBP5.37□□□□□ -1.55
ATG4A-204ENST00000372246 CDH17Q12864 832 aa5.37□□□□□ -1.55
ATG4A-204ENST00000372246 RAPSNQ13702 412 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms