RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 FFAR2O15552 330 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 FKBP6O75344 327 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 CIB2O75838 187 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 DXOO77932 396 aaKnown RBP14.86□□□□□ -0.03
LMO4-201ENST00000370542 IGSF6O95976 241 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 CREB1P16220 341 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 KRT15P19012 456 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 IGFALSP35858 605 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 KCNJ1P48048 391 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 CSNK1DP48730 415 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 DUSP3P51452 185 aaPredicted RBP14.86□□□□□ -0.03
LMO4-201ENST00000370542 NDST2P52849 883 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 DAB2P98082 770 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 SF3A3Q12874 501 aaKnown RBP eCLIP14.86□□□□□ -0.03
LMO4-201ENST00000370542 MAMLD1Q13495 774 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 PDE1CQ14123 709 aaPredicted RBP14.86□□□□□ -0.03
LMO4-201ENST00000370542 MORF4L2Q15014 288 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 KLHL38Q2WGJ6 581 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 TRMT5Q32P41 509 aaKnown RBP14.86□□□□□ -0.03
LMO4-201ENST00000370542 TAF1BQ53T94 588 aaPredicted RBP14.86□□□□□ -0.03
LMO4-201ENST00000370542 AFMIDQ63HM1 303 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 ADGRG6Q86SQ4 1221 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 RYBPQ8N488 228 aaPredicted RBP14.86□□□□□ -0.03
LMO4-201ENST00000370542 TP53I13Q8NBR0 393 aaPredicted RBP14.86□□□□□ -0.03
LMO4-201ENST00000370542 FAM81AQ8TBF8 368 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 FNIP1Q8TF40 1166 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 BTN2A2Q8WVV5 523 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 SCG3Q8WXD2 468 aaKnown RBP14.86□□□□□ -0.03
LMO4-201ENST00000370542 ZNF75CPQ92670 426 aaPredicted RBP14.86□□□□□ -0.03
LMO4-201ENST00000370542 BOCQ9BWV1 1114 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 NCKIPSDQ9NZQ3 722 aa14.86□□□□□ -0.03
LMO4-201ENST00000370542 DRG1Q9Y295 367 aaKnown RBP14.86□□□□□ -0.03
LMO4-201ENST00000370542 PYCARD-AS1I3L0S3 204 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 DNALI1O14645 258 aaPredicted RBP14.85□□□□□ -0.03
LMO4-201ENST00000370542 INSIG1O15503 277 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 AQP9O43315 295 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 BRINP1O60477 761 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 PRAMEF11O60813 436 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 TM7SF2O76062 418 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 JUNDP17535 347 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 CA4P22748 312 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 RHOAP61586 193 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 PTK2BQ14289 1009 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 GRM3Q14832 879 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 DNAL1Q4LDG9 190 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 AADACL2Q6P093 401 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 SCYL2Q6P3W7 929 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 AAGABQ6PD74 315 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 IGF2-ASQ6U949 168 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 CYP4V2Q6ZWL3 525 aaPredicted RBP14.85□□□□□ -0.03
LMO4-201ENST00000370542 GPR155Q7Z3F1 870 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 NET1Q7Z628 596 aaPredicted RBP14.85□□□□□ -0.03
LMO4-201ENST00000370542 RHOT1Q8IXI2 618 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 KATNAL2Q8IYT4 538 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 ST13P4Q8IZP2 240 aaPredicted RBP14.85□□□□□ -0.03
LMO4-201ENST00000370542 CYP4X1Q8N118 509 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 EXD1Q8NHP7 514 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 CCDC110Q8TBZ0 833 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 C1orf54Q8WWF1 131 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 FGF11Q92914 225 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 PPP1R14BQ96C90 147 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 ZNF641Q96N77 438 aaPredicted RBP14.85□□□□□ -0.03
LMO4-201ENST00000370542 RBM15Q96T37 977 aaKnown RBP eCLIP14.85□□□□□ -0.03
LMO4-201ENST00000370542 PARVAQ9NVD7 372 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 ATXN10Q9UBB4 475 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 SHOC2Q9UQ13 582 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 AK5Q9Y6K8 562 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 RP1P56715 2156 aa14.85□□□□□ -0.03
LMO4-201ENST00000370542 LRRK1Q38SD2 2015 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 CFAP69A5D8W1 941 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 TMEM191CA6NGB0 347 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 B8ZZF3 427 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 LMO7DNF2Z398 122 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 NEMP1O14524 444 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 TYROBPO43914 113 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 MMP20O60882 483 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 GM2AP17900 193 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 POLE2P56282 527 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 AP2B1P63010 937 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 CDK16Q00536 496 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 SEMG2Q02383 582 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 ELP6Q0PNE2 266 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 ITGA9Q13797 1035 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 MAP7Q14244 749 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 RCN1Q15293 331 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 UGP2Q16851 508 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 TBC1D25Q3MII6 688 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 ZNF449Q6P9G9 518 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 DCUN1D2Q6PH85 259 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 LCA5Q86VQ0 697 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 PSTKQ8IV42 348 aaKnown RBP14.84□□□□□ -0.03
LMO4-201ENST00000370542 B4GALNT2Q8NHY0 566 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 SPOCK2Q92563 424 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 PTCD3Q96EY7 689 aaKnown RBP14.84□□□□□ -0.03
LMO4-201ENST00000370542 RBM41Q96IZ5 413 aaKnown RBP14.84□□□□□ -0.03
LMO4-201ENST00000370542 TUBGCP5Q96RT8 1024 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 EPB41L1Q9H4G0 881 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 SUV39H2Q9H5I1 410 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 ZWILCHQ9H900 591 aa14.84□□□□□ -0.03
LMO4-201ENST00000370542 MRPL47Q9HD33 250 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms