RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 LGALS16A8MUM7 142 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 CEACAM4O75871 244 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 MT-ND3P03897 115 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 EBLN1P0CF75 366 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 RARAP10276 462 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 POU3F2P20265 443 aaPredicted RBP15.12■□□□□ 0.01
SSR4-204ENST00000370087 RPL10P27635 214 aaKnown RBP15.12■□□□□ 0.01
SSR4-204ENST00000370087 TNFRSF8P28908 595 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 ARL4AP40617 200 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 MMRN1Q13201 1228 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 QPCTQ16769 361 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 KHDC1Q4VXA5 237 aaKnown RBP15.12■□□□□ 0.01
SSR4-204ENST00000370087 SLC6A19Q695T7 634 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 CLEC17AQ6ZS10 378 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 ZNF547Q8IVP9 402 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 RBMXL3Q8N7X1 1067 aaKnown RBP15.12■□□□□ 0.01
SSR4-204ENST00000370087 AVL9Q8NBF6 648 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 FDCSPQ8NFU4 85 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 ADAMTS17Q8TE56 1095 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 THAP4Q8WY91 577 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 MAML1Q92585 1016 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 NUDT9Q9BW91 350 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 PCDH9Q9HC56 1237 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 SLC40A1Q9NP59 571 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 FANCLQ9NW38 375 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 TTLL3Q9Y4R7 772 aa15.12■□□□□ 0.01
SSR4-204ENST00000370087 CHUKO15111 745 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 MTX2O75431 263 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 HLA-DQB2P05538 268 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 CD48P09326 243 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 ATP1A3P13637 1013 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 FERP16591 822 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 PCK1P35558 622 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 DRG2P55039 364 aaKnown RBP15.11■□□□□ 0.01
SSR4-204ENST00000370087 NR6A1Q15406 480 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 CHRNA6Q15825 494 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 INSCQ1MX18 579 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 C1QL3Q5VWW1 255 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 LCN10Q6JVE6 187 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 SYVN1Q86TM6 617 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 RAVER1Q8IY67 606 aaKnown RBP15.11■□□□□ 0.01
SSR4-204ENST00000370087 GPR150Q8NGU9 434 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 ZNF653Q96CK0 615 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 SLC41A2Q96JW4 573 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 POT1Q9NUX5 634 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 PKD2L2Q9NZM6 624 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 SEMA5BQ9P283 1151 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 MAP10Q9P2G4 905 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 TRIM10Q9UDY6 481 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 RARRES3Q9UL19 164 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 DNPEPQ9ULA0 475 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 WDR37Q9Y2I8 494 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 CSMD2Q7Z408 3487 aa15.11■□□□□ 0.01
SSR4-204ENST00000370087 MTA2O94776 668 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 MMP2P08253 660 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 ZNF7P17097 686 aaPredicted RBP15.1■□□□□ 0.01
SSR4-204ENST00000370087 GALNT2Q10471 571 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 GPS2Q13227 327 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 GALNT3Q14435 633 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 ZNF569Q5MCW4 686 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 E4F1Q66K89 784 aaPredicted RBP15.1■□□□□ 0.01
SSR4-204ENST00000370087 APTXQ7Z2E3 356 aaKnown RBP15.1■□□□□ 0.01
SSR4-204ENST00000370087 SRRM1Q8IYB3 904 aaKnown RBP15.1■□□□□ 0.01
SSR4-204ENST00000370087 SIDT2Q8NBJ9 832 aaKnown RBP15.1■□□□□ 0.01
SSR4-204ENST00000370087 SLC38A9Q8NBW4 561 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 GPR26Q8NDV2 337 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 ZDHHC12Q96GR4 267 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 ERGIC2Q96RQ1 377 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 GPR87Q9BY21 358 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 TRIM39Q9HCM9 518 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 PDE7BQ9NP56 450 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 RBM22Q9NW64 420 aaKnown RBP eCLIP15.1■□□□□ 0.01
SSR4-204ENST00000370087 MYO1AQ9UBC5 1043 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 EPHA6Q9UF33 1036 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 LIMA1Q9UHB6 759 aaKnown RBP15.1■□□□□ 0.01
SSR4-204ENST00000370087 SRPK3Q9UPE1 567 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 ZNF451Q9Y4E5 1061 aa15.1■□□□□ 0.01
SSR4-204ENST00000370087 SLC25A14O95258 325 aaPredicted RBP15.09■□□□□ 0.01
SSR4-204ENST00000370087 FTLP02792 175 aaPredicted RBP15.09■□□□□ 0.01
SSR4-204ENST00000370087 TPM2P07951 284 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 PIRTP0C851 137 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 SERPINB6P35237 376 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 ITGA1P56199 1179 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 SLC25A11Q02978 314 aaKnown RBP15.09■□□□□ 0.01
SSR4-204ENST00000370087 UBXN1Q04323 297 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 PRAMEF17Q5VTA0 474 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 NCBP2-AS2Q69YL0 99 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 ABRAXAS1Q6UWZ7 409 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 C11orf96Q7Z7L8 435 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 ZNF514Q96K75 400 aaPredicted RBP15.09■□□□□ 0.01
SSR4-204ENST00000370087 BTBD6Q96KE9 485 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 RANBP9Q96S59 729 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 MAP3K3Q99759 626 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 TIMM29Q9BSF4 260 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 SPATA16Q9BXB7 569 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 RAB33BQ9H082 229 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 NUP62CLQ9H1M0 184 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 CHST8Q9H2A9 424 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 SLAMF7Q9NQ25 335 aa15.09■□□□□ 0.01
SSR4-204ENST00000370087 TMPRSS11EQ9UL52 423 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms