RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 CITED4Q96RK1 184 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 OSBPL2Q9H1P3 480 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 ING4Q9UNL4 249 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 TESMINQ9Y4I5 508 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 FCER2P06734 321 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 PTNP21246 168 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 MEA1Q16626 185 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 OR2L3Q8NG85 312 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 HSFY1Q96LI6 401 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 RNF121Q9H920 327 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 NOBOXO60393 691 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 RSL1D1O76021 490 aaKnown RBP18.03■□□□□ 0.48
SNX27-202ENST00000368841 LRIG2O94898 1065 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 MYCLP1P12525 358 aaPredicted RBP18.03■□□□□ 0.48
SNX27-202ENST00000368841 SMIM11AP58511 58 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 MYBPC3Q14896 1274 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 GCNT6Q5T4J0 391 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 AMER2Q8N7J2 671 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 OR5M3Q8NGP4 307 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 SLC28A3Q9HAS3 691 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 CKLFQ9UBR5 152 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 GGA2Q9UJY4 613 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 NADKO95544 446 aaPredicted RBP18.02■□□□□ 0.48
SNX27-202ENST00000368841 NMBRP28336 390 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 FAM47BQ8NA70 645 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 OR2T12Q8NG77 320 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 PLEKHA1Q9HB21 404 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 MED31Q9Y3C7 131 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 ABCA9Q8IUA7 1624 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 CYP27C1Q4G0S4 372 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 PGM2Q96G03 612 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 FAM129BQ96TA1 746 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 IDI2Q9BXS1 227 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 PCDHGC5Q9Y5F6 944 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 CDK14O94921 469 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 IGFBP5P24593 272 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 AZGP1P25311 298 aaKnown RBP18.02■□□□□ 0.48
SNX27-202ENST00000368841 GANABQ14697 944 aaKnown RBP18.02■□□□□ 0.48
SNX27-202ENST00000368841 PRR23BQ6ZRT6 265 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 NANOGNBQ7Z5D8 188 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 KBTBD8Q8NFY9 601 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 SNX33Q8WV41 574 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 C11orf24Q96F05 449 aaPredicted RBP18.02■□□□□ 0.48
SNX27-202ENST00000368841 RIC1Q4ADV7 1423 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 TCRBV7S2A1N4TA0A589 114 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 PRAMEF1O95521 474 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 CST3P01034 146 aaPredicted RBP18.02■□□□□ 0.48
SNX27-202ENST00000368841 PBX3P40426 434 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 CBX5P45973 191 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 CHAF1BQ13112 559 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 GLYATQ6IB77 296 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 PHF13Q86YI8 300 aaPredicted RBP18.02■□□□□ 0.48
SNX27-202ENST00000368841 GLOD4Q9HC38 313 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 STOML2Q9UJZ1 356 aa18.02■□□□□ 0.48
SNX27-202ENST00000368841 HOXC12P31275 282 aa18.02■□□□□ 0.47
SNX27-202ENST00000368841 PDK4Q16654 411 aa18.02■□□□□ 0.47
SNX27-202ENST00000368841 CLP1Q92989 425 aaKnown RBP18.02■□□□□ 0.47
SNX27-202ENST00000368841 MT-CYBP00156 380 aaPredicted RBP18.02■□□□□ 0.47
SNX27-202ENST00000368841 GOT2P00505 430 aaKnown RBP18.02■□□□□ 0.47
SNX27-202ENST00000368841 FABP3P05413 133 aa18.02■□□□□ 0.47
SNX27-202ENST00000368841 TCF4P15884 667 aa18.02■□□□□ 0.47
SNX27-202ENST00000368841 ZNF8P17098 575 aaPredicted RBP18.02■□□□□ 0.47
SNX27-202ENST00000368841 TBC1D17Q9HA65 648 aa18.02■□□□□ 0.47
SNX27-202ENST00000368841 GRIN2DO15399 1336 aa18.02■□□□□ 0.47
SNX27-202ENST00000368841 HDAC3O15379 428 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 FGF1P05230 155 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 RPL3P39023 403 aaKnown RBP18.01■□□□□ 0.47
SNX27-202ENST00000368841 CAPGP40121 348 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 TXNL4AP83876 142 aaKnown RBP18.01■□□□□ 0.47
SNX27-202ENST00000368841 HSDL1Q3SXM5 330 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 OR51V1Q9H2C8 321 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 DDX6P26196 483 aaKnown RBP eCLIP18.01■□□□□ 0.47
SNX27-202ENST00000368841 CYP2C18P33260 490 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 MAN2A2P49641 1150 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 TLR1Q15399 786 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 HKDC1Q2TB90 917 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 TTC27Q6P3X3 843 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 GALNT18Q6P9A2 607 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 ARMCX6Q7L4S7 300 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 GRHL3Q8TE85 626 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 DNAJC19Q96DA6 116 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 CDK15Q96Q40 435 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 SPATA31C1P0DKV0 1188 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 GRM5P41594 1212 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 MAPK8P45983 427 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 DUPD1Q68J44 220 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 PAOXQ6QHF9 649 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 FAM156AQ8NDB6 213 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 ZNF570Q96NI8 536 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 EXD2Q9NVH0 621 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 ZNF446Q9NWS9 450 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 TNFRSF11BO00300 401 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 ZNF208O43345 1280 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 PLA2G16P53816 162 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 PLPPR4Q7Z2D5 763 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 CRYBG2Q8N1P7 616 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 BSNDQ8WZ55 320 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 SPOCK2Q92563 424 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 R3HDM2Q9Y2K5 976 aaKnown RBP18.01■□□□□ 0.47
SNX27-202ENST00000368841 RIPK3Q9Y572 518 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms