RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 CDKN2DP55273 166 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 PPP2CBP62714 309 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 PPP2CAP67775 309 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 SEPT7Q16181 437 aaKnown RBP12.17□□□□□ -0.46
TUBE1-202ENST00000368662 TBC1D1Q86TI0 1168 aaPredicted RBP12.17□□□□□ -0.46
TUBE1-202ENST00000368662 CEP97Q8IW35 865 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 TOE1Q96GM8 510 aaKnown RBP12.17□□□□□ -0.46
TUBE1-202ENST00000368662 OLFM1Q99784 485 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 FAM126AQ9BYI3 521 aaPredicted RBP12.17□□□□□ -0.46
TUBE1-202ENST00000368662 SLC13A1Q9BZW2 595 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 PCED1AQ9H1Q7 454 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 EPHX3Q9H6B9 360 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 WDR26Q9H7D7 661 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 GRID1Q9ULK0 1009 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 CNOT6Q9ULM6 557 aaKnown RBP12.17□□□□□ -0.46
TUBE1-202ENST00000368662 NUMA1Q14980 2115 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 C10orf142B7Z368 130 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 K7ESM1 405 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 INPP4BO15327 924 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 VEGFDO43915 354 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 SPAG7O75391 227 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 HOXA6P31267 233 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 KPNA2P52292 529 aaKnown RBP12.17□□□□□ -0.46
TUBE1-202ENST00000368662 B4GALNT1Q00973 533 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 TMEM115Q12893 351 aaPredicted RBP12.17□□□□□ -0.46
TUBE1-202ENST00000368662 FGL2Q14314 439 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 IRF4Q15306 451 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 TSNAXIP1Q2TAA8 658 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 CLDN19Q8N6F1 224 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 ZNF514Q96K75 400 aaPredicted RBP12.17□□□□□ -0.46
TUBE1-202ENST00000368662 SPACA7Q96KW9 195 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 TPSD1Q9BZJ3 242 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 TRIM39Q9HCM9 518 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 TRMT6Q9UJA5 497 aaKnown RBP12.17□□□□□ -0.46
TUBE1-202ENST00000368662 IGHV1OR15-9A0A0B4J2B8 117 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 CCDC163A0A0D9SF12 145 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 GPR89AB7ZAQ6 455 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 PHGDHO43175 533 aaKnown RBP12.16□□□□□ -0.46
TUBE1-202ENST00000368662 MAGEC1O60732 1142 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 FTH1P02794 183 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 GPR89BP0CG08 455 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 HNRNPA2B1P22626 353 aaKnown RBP12.16□□□□□ -0.46
TUBE1-202ENST00000368662 MAT2AP31153 395 aaKnown RBP12.16□□□□□ -0.46
TUBE1-202ENST00000368662 CDK3Q00526 305 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 GTF2H3Q13889 308 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 FAM83EQ2M2I3 478 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 PPM1JQ5JR12 505 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 KIAA0895LQ68EN5 471 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 CLEC14AQ86T13 490 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 HEATR4Q86WZ0 1026 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 PELI3Q8N2H9 469 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 PLA2G15Q8NCC3 412 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 COX14Q96I36 57 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 TEX101Q9BY14 249 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 MBNL1Q9NR56 388 aaKnown RBP12.16□□□□□ -0.46
TUBE1-202ENST00000368662 LATS2Q9NRM7 1088 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 PHPT1Q9NRX4 125 aaPredicted RBP12.16□□□□□ -0.46
TUBE1-202ENST00000368662 SPATS2LQ9NUQ6 558 aaKnown RBP12.16□□□□□ -0.46
TUBE1-202ENST00000368662 KLHL42Q9P2K6 505 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 DMTF1Q9Y222 760 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 OAS3Q9Y6K5 1087 aaKnown RBP12.16□□□□□ -0.46
TUBE1-202ENST00000368662 PLXNB3Q9ULL4 1909 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 K7ESF4 209 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 TOR1BO14657 336 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 FPGTO14772 594 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 KPNA5O15131 536 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 SLC31A1O15431 190 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 NDUFS2O75306 463 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 NIPSNAP2O75323 286 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 CDK14O94921 469 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 KLHL2O95198 593 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 PDGFBP01127 241 aaPredicted RBP12.16□□□□□ -0.46
TUBE1-202ENST00000368662 ZNF37AP17032 561 aaPredicted RBP12.16□□□□□ -0.46
TUBE1-202ENST00000368662 INPP5AQ14642 412 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 TTLL9Q3SXZ7 439 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 USP39Q53GS9 565 aaKnown RBP12.16□□□□□ -0.46
TUBE1-202ENST00000368662 AGAP9Q5VTM2 703 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 KYAT3Q6YP21 454 aaKnown RBP12.16□□□□□ -0.46
TUBE1-202ENST00000368662 NKAPQ8N5F7 415 aaKnown RBP12.16□□□□□ -0.46
TUBE1-202ENST00000368662 TCP10LQ8TDR4 215 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 KLK6Q92876 244 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 UBXN10Q96LJ8 280 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 GPR21Q99679 349 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 SPATA6Q9NWH7 488 aaPredicted RBP12.16□□□□□ -0.46
TUBE1-202ENST00000368662 MED16Q9Y2X0 877 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 DHRS7Q9Y394 339 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 PRSS21Q9Y6M0 314 aa12.16□□□□□ -0.46
TUBE1-202ENST00000368662 TTC28Q96AY4 2481 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 TECTAO75443 2155 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 TMEM221A6NGB7 291 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 M0R296 226 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 AXIN1O15169 862 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 PI15O43692 258 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 MTX2O75431 263 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 WISP3O95389 354 aaPredicted RBP12.15□□□□□ -0.46
TUBE1-202ENST00000368662 HOXC4P09017 264 aaPredicted RBP12.15□□□□□ -0.46
TUBE1-202ENST00000368662 GSTM1P09488 218 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 MYCLP1P12525 358 aaPredicted RBP12.15□□□□□ -0.46
TUBE1-202ENST00000368662 AKT2P31751 481 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 RPA3P35244 121 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms