RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 RFPL2O75678 378 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 ALX3O95076 343 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 EPN2O95208 641 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 LUC7L3O95232 432 aaKnown RBP8.77□□□□□ -1.01
TPM3-213ENST00000368545 DCNP07585 359 aaKnown RBP8.77□□□□□ -1.01
TPM3-213ENST00000368545 INHBAP08476 426 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 ACVRL1P37023 503 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 ZXDBP98169 803 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 SLC10A7Q0GE19 358 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 SPARCL1Q14515 664 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 KBTBD12Q3ZCT8 623 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 MPPE1Q53F39 396 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 SPANXN3Q5MJ09 141 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 SFRP5Q5T4F7 317 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 LRRC6Q86X45 466 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 NKAPQ8N5F7 415 aaKnown RBP8.77□□□□□ -1.01
TPM3-213ENST00000368545 CAMKK1Q8N5S9 505 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 TEX19Q8NA77 164 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 SLC44A1Q8WWI5 657 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 CDKL2Q92772 493 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 TMA16Q96EY4 203 aaKnown RBP8.77□□□□□ -1.01
TPM3-213ENST00000368545 COX4I2Q96KJ9 171 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 CAPS2Q9BXY5 557 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 SLC46A2Q9BY10 475 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 ACE2Q9BYF1 805 aaPredicted RBP8.77□□□□□ -1.01
TPM3-213ENST00000368545 SYBUQ9NX95 663 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 UBA2Q9UBT2 640 aaPredicted RBP8.77□□□□□ -1.01
TPM3-213ENST00000368545 TBK1Q9UHD2 729 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 PCDHGB3Q9Y5G1 929 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 DOCK6Q96HP0 2047 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 CHD8Q9HCK8 2581 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 A0A0D9SEW6 157 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 FAM237BA0A1B0GVD1 139 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 FAM159BA6NKW6 160 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 TSPAN3O60637 253 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 NDUFS2O75306 463 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 USP1O94782 785 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 ALDH1A2O94788 518 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 ZNF205O95201 554 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 MT-CYBP00156 380 aaPredicted RBP8.76□□□□□ -1.01
TPM3-213ENST00000368545 CYBBP04839 570 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 GLULP15104 373 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 HOXB4P17483 251 aaPredicted RBP8.76□□□□□ -1.01
TPM3-213ENST00000368545 CCR2P41597 374 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 CDH18Q13634 790 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 SIM2Q14190 667 aaPredicted RBP8.76□□□□□ -1.01
TPM3-213ENST00000368545 CRYMQ14894 314 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 PRSS36Q5K4E3 855 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 STXBP5Q5T5C0 1151 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 STPG1Q5TH74 334 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 CPZQ66K79 652 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 EXOC3L1Q86VI1 746 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 LONP2Q86WA8 852 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 SLC26A11Q86WA9 606 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 IPMKQ8NFU5 416 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 SPATA22Q8NHS9 363 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 DNASE1L2Q92874 299 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 MGME1Q9BQP7 344 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 C1GALT1Q9NS00 363 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 MOCS1Q9NZB8 636 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 MYLKQ15746 1914 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 CHD7Q9P2D1 2997 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 OTOGLQ3ZCN5 2332 aa8.76□□□□□ -1.01
TPM3-213ENST00000368545 CXorf51AA0A1B0GTR3 108 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 F8W735 103 aaPredicted RBP8.75□□□□□ -1.01
TPM3-213ENST00000368545 USP12O75317 370 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 TUSC2O75896 110 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 GJA1P17302 382 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 ADRA1AP35348 466 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 EFTUD2Q15029 972 aaKnown RBP eCLIP8.75□□□□□ -1.012e-18■■■■□ 20.8
TPM3-213ENST00000368545 TEAD2Q15562 447 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 GPR19Q15760 415 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 LGSNQ5TDP6 509 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 RNF43Q68DV7 783 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 TMEM135Q86UB9 458 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 TRABD2AQ86V40 505 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 MFN1Q8IWA4 741 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 CTAGE3PQ8IX95 158 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 CARNMT1Q8N4J0 409 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 ZNF557Q8N988 423 aaPredicted RBP8.75□□□□□ -1.01
TPM3-213ENST00000368545 DCAF4L2Q8NA75 395 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 OR7D4Q8NG98 312 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 OR52K2Q8NGK3 314 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 DCAKDQ8WVC6 231 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 TADA1Q96BN2 335 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 PSKH2Q96QS6 385 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 SELENOSQ9BQE4 189 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 CRB3Q9BUF7 120 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 FICDQ9BVA6 458 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 CINPQ9BW66 212 aaPredicted RBP8.75□□□□□ -1.01
TPM3-213ENST00000368545 QRSL1Q9H0R6 528 aaKnown RBP8.75□□□□□ -1.01
TPM3-213ENST00000368545 PLAC1Q9HBJ0 212 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 MRM3Q9HC36 420 aaKnown RBP8.75□□□□□ -1.01
TPM3-213ENST00000368545 AP5S1Q9NUS5 200 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 TDP1Q9NUW8 608 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 TBC1D14Q9P2M4 693 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 ZNF69Q9UC07 566 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 WASF3Q9UPY6 502 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 ZNF281Q9Y2X9 895 aa8.75□□□□□ -1.01
TPM3-213ENST00000368545 NCOR2Q9Y618 2525 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms