RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CELA2BP08218 269 aaPredicted RBP13.73□□□□□ -0.21
TPM3-211ENST00000368531 RALBP11234 206 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 NME1P15531 152 aaKnown RBP13.73□□□□□ -0.21
TPM3-211ENST00000368531 PMLP29590 882 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 PBLDP30039 288 aaPredicted RBP13.73□□□□□ -0.21
TPM3-211ENST00000368531 BLKP51451 505 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 HNRNPKP61978 463 aaKnown RBP eCLIP13.73□□□□□ -0.21
TPM3-211ENST00000368531 CTBP1Q13363 440 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 ERCC6LQ2NKX8 1250 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 HSP90AA5PQ58FG0 334 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 PRRT3Q5FWE3 981 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 TRMT10BQ6PF06 316 aaKnown RBP13.73□□□□□ -0.21
TPM3-211ENST00000368531 TMEM220Q6QAJ8 160 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 CHST15Q7LFX5 561 aaPredicted RBP13.73□□□□□ -0.21
TPM3-211ENST00000368531 SDCCAG8Q86SQ7 713 aaPredicted RBP13.73□□□□□ -0.21
TPM3-211ENST00000368531 GALNT13Q8IUC8 556 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 TRAPPC5Q8IUR0 188 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 OXR1Q8N573 874 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 BEND7Q8N7W2 519 aaPredicted RBP13.73□□□□□ -0.21
TPM3-211ENST00000368531 CCL4L1Q8NHW4 92 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 SGF29Q96ES7 293 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 TTC1Q99614 292 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 FAM129AQ9BZQ8 928 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 ZCCHC2Q9C0B9 1178 aaKnown RBP13.73□□□□□ -0.21
TPM3-211ENST00000368531 TMEM168Q9H0V1 697 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 PLAC1Q9HBJ0 212 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 TMEM9BQ9NQ34 198 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 TM7SF3Q9NS93 570 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 UCKL1Q9NWZ5 548 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 VPS18Q9P253 973 aa13.73□□□□□ -0.21
TPM3-211ENST00000368531 PIKFYVEQ9Y2I7 2098 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 CACNA1EQ15878 2313 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.72□□□□□ -0.21
TPM3-211ENST00000368531 UBA6A0AVT1 1052 aaPredicted RBP13.72□□□□□ -0.21
TPM3-211ENST00000368531 C4orf47A7E2U8 309 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 CFAP99D6REC4 459 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 FFAR2O15552 330 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 OR1I1O60431 355 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 DFNA5O60443 496 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 PIAS2O75928 621 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 FAM153BP0C7A2 387 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 ATP1B2P14415 290 aaPredicted RBP13.72□□□□□ -0.21
TPM3-211ENST00000368531 RXRGP48443 463 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 CCT8P50990 548 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 CTSCP53634 463 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 TUBB4BP68371 445 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 B4GALNT1Q00973 533 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 NAA30Q147X3 362 aaPredicted RBP13.72□□□□□ -0.21
TPM3-211ENST00000368531 FAM153CQ494X1 144 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 PYCR3Q53H96 274 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 AARS2Q5JTZ9 985 aaKnown RBP13.72□□□□□ -0.21
TPM3-211ENST00000368531 LYPLAL1Q5VWZ2 237 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 STEAP4Q687X5 459 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 ZNF470Q6ECI4 717 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 MRNIPQ6NTE8 343 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 CERS6Q6ZMG9 384 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 C3orf62Q6ZUJ4 267 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 DENND6AQ8IWF6 608 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 CLDN19Q8N6F1 224 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 GSDMBQ8TAX9 411 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 FAM122AQ96E09 287 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 CERS2Q96G23 380 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 SGSM3Q96HU1 749 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 OR2M4Q96R27 311 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 LRRC61Q9BV99 259 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 VPS37BQ9H9H4 285 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 SLC17A6Q9P2U8 582 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 SPASTQ9UBP0 616 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 FAM8A1Q9UBU6 413 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 PRSS21Q9Y6M0 314 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 DGKBQ9Y6T7 804 aa13.72□□□□□ -0.21
TPM3-211ENST00000368531 PIAS1O75925 651 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 MYBL2P10244 700 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 ACP5P13686 325 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 DGKAP23743 735 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 AK4P27144 223 aaPredicted RBP13.71□□□□□ -0.21
TPM3-211ENST00000368531 EPHA8P29322 1005 aaPredicted RBP13.71□□□□□ -0.21
TPM3-211ENST00000368531 PPARGP37231 505 aaPredicted RBP13.71□□□□□ -0.21
TPM3-211ENST00000368531 TTPAP49638 278 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 MPP1Q00013 466 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 CBLBQ13191 982 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 KYNUQ16719 465 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 INSCQ1MX18 579 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 CEP128Q6ZU80 1094 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 TAF8Q7Z7C8 310 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 ALYREFQ86V81 257 aaKnown RBP13.71□□□□□ -0.21
TPM3-211ENST00000368531 LRRTM4Q86VH4 590 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 ZNF548Q8NEK5 533 aaPredicted RBP13.71□□□□□ -0.21
TPM3-211ENST00000368531 CALML6Q8TD86 181 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 HEXDCQ8WVB3 486 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 SCARF2Q96GP6 870 aaPredicted RBP13.71□□□□□ -0.21
TPM3-211ENST00000368531 PHACTR1Q9C0D0 580 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 CLPBQ9H078 707 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 RMI1Q9H9A7 625 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 FBXO6Q9NRD1 293 aaPredicted RBP13.71□□□□□ -0.21
TPM3-211ENST00000368531 FBXO5Q9UKT4 447 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 DOLKQ9UPQ8 538 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 KCNK6Q9Y257 313 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 DNAJC16Q9Y2G8 782 aa13.71□□□□□ -0.21
TPM3-211ENST00000368531 CRYL1Q9Y2S2 319 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms