RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 A0A1B0GVC2 190 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 TLX3O43711 291 aaPredicted RBP16.62■□□□□ 0.25
NID1-202ENST00000366595 GNALP38405 381 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 SLC12A3P55017 1021 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 CTBP1Q13363 440 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 SLC9A9Q8IVB4 645 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 PPM1MQ96MI6 270 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 TSSK3Q96PN8 268 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 HIST1H2AAQ96QV6 131 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 AGXT2Q9BYV1 514 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 PLK2Q9NYY3 685 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 ZNF510Q9Y2H8 683 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 GJB6O95452 261 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 SLC9B1Q4ZJI4 515 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 MPSTP25325 297 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 RPL26P61254 145 aaKnown RBP16.62■□□□□ 0.25
NID1-202ENST00000366595 PLEKHG6Q3KR16 790 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 CERS6Q6ZMG9 384 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 TMEM161BQ8NDZ6 487 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 OR4C6Q8NH72 309 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 NXPE2Q96DL1 559 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 APOLD1Q96LR9 279 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.62■□□□□ 0.255e-6■□□□□ 11.2
NID1-202ENST00000366595 CACNB4O00305 520 aaPredicted RBP16.61■□□□□ 0.25
NID1-202ENST00000366595 STOMP27105 288 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 SLC25A25Q6KCM7 469 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 CRYBG2Q8N1P7 616 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 TWIST2Q8WVJ9 160 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 CEP295NLQ96MC4 621 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 DNAJB4Q9UDY4 337 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 KCNIP3Q9Y2W7 256 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 RBM47A0AV96 593 aaKnown RBP16.61■□□□□ 0.25
NID1-202ENST00000366595 RPP40O75818 363 aaKnown RBP16.61■□□□□ 0.25
NID1-202ENST00000366595 H6PDO95479 791 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 C2P06681 752 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 CYP3A4P08684 503 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 WSCD2Q2TBF2 565 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 RBM48Q5RL73 367 aaKnown RBP16.61■□□□□ 0.25
NID1-202ENST00000366595 REP15Q6BDI9 236 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 XKRXQ6PP77 449 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 ZYG11AQ6WRX3 759 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 DENND1CQ8IV53 801 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 SAMD14Q8IZD0 417 aaPredicted RBP16.61■□□□□ 0.25
NID1-202ENST00000366595 SHC3Q92529 594 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 DNASE1L2Q92874 299 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 SLC17A7Q9P2U7 560 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 EFCAB9A8MZ26 197 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 CALCAP01258 141 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 PSKH1P11801 424 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 MVKQ03426 396 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 CARTPTQ16568 116 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 IFI44LQ53G44 452 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 GLB1L3Q8NCI6 653 aaPredicted RBP16.61■□□□□ 0.25
NID1-202ENST00000366595 XAGE5Q8WWM1 108 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 ZNF471Q9BX82 626 aaPredicted RBP16.61■□□□□ 0.25
NID1-202ENST00000366595 MIOSQ9NXC5 875 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 PER2O15055 1255 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 CLDN9O95484 217 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 C8BP07358 591 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 CCR10P46092 362 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 WNT3AP56704 352 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 SYCE2Q6PIF2 218 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 AMIGO1Q86WK6 493 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 ERI1Q8IV48 349 aaKnown RBP16.61■□□□□ 0.25
NID1-202ENST00000366595 CPNE9Q8IYJ1 553 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 SLC43A3Q8NBI5 491 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 TMEM109Q9BVC6 243 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 PORCNQ9H237 461 aa16.61■□□□□ 0.25
NID1-202ENST00000366595 CUEDC1Q9NWM3 386 aaPredicted RBP16.61■□□□□ 0.25
NID1-202ENST00000366595 H7C2Y5 167 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 BUD23O43709 281 aaKnown RBP16.6■□□□□ 0.25
NID1-202ENST00000366595 NME6O75414 186 aaPredicted RBP16.6■□□□□ 0.25
NID1-202ENST00000366595 ITGA10O75578 1167 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 PKMP14618 531 aaKnown RBP16.6■□□□□ 0.25
NID1-202ENST00000366595 CDH13P55290 713 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 SULT2A1Q06520 285 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 VMACQ2NL98 169 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 OR5K1Q8NHB7 308 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 POF1BQ8WVV4 589 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 SGCDQ92629 289 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 MECRQ9BV79 373 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 BPIFA1Q9NP55 256 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 DNAAF2Q9NVR5 837 aaKnown RBP16.6■□□□□ 0.25
NID1-202ENST00000366595 LINGO3P0C6S8 592 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 ZNF286BP0CG31 522 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 PGAM2P15259 253 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 HSD3B2P26439 372 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 MATKP42679 507 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 SH3RF1Q7Z6J0 888 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 FAM83AQ86UY5 434 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 HDDC3Q8N4P3 179 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 THAP6Q8TBB0 222 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 LNX1Q8TBB1 728 aaPredicted RBP16.6■□□□□ 0.25
NID1-202ENST00000366595 DMRTB1Q96MA1 342 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 SLC39A3Q9BRY0 314 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 NUSAP1Q9BXS6 441 aaKnown RBP16.6■□□□□ 0.25
NID1-202ENST00000366595 TREM1Q9NP99 234 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 DNAJB9Q9UBS3 223 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 A0A1W2PPM1 405 aa16.6■□□□□ 0.25
NID1-202ENST00000366595 STK16O75716 305 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms