RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 SLC10A7Q0GE19 358 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 TUBB3Q13509 450 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 ELOAQ14241 798 aaKnown RBP8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 KIR2DS5Q14953 304 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 PLEKHS1Q5SXH7 462 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 LCE2AQ5TA79 106 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 VWA5B1Q5TIE3 1220 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 IZUMO3Q5VZ72 239 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 IGFL3Q6UXB1 125 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 STRADAQ7RTN6 431 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 SLFN11Q7Z7L1 901 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 HPS6Q86YV9 775 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 ARFGAP1Q8N6T3 406 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 SLC20A1Q8WUM9 679 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 PIH1D2Q8WWB5 315 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 SEC14L1Q92503 715 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 MR1Q95460 341 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 SNX21Q969T3 373 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 AP2M1Q96CW1 435 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 SLC41A2Q96JW4 573 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 HERPUD2Q9BSE4 406 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 RIOK2Q9BVS4 552 aaKnown RBP8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 UCK1Q9HA47 277 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 NOD2Q9HC29 1040 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 GDPD2Q9HCC8 539 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 TMEM51Q9NW97 253 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 GPATCH2LQ9NWQ4 482 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 DTLQ9NZJ0 730 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 SEMA5BQ9P283 1151 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 MAN1B1Q9UKM7 699 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 TCFL5Q9UL49 500 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 CTNND2Q9UQB3 1225 aa8.34□□□□□ -1.07
HMGB1P39-201ENST00000366304 ACANP16112 2415 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 C19orf84I3L1E1 186 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 DDX3YO15523 660 aaKnown RBP8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 ASMTLO95671 621 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 PDHA1P08559 390 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 XRCC1P18887 633 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 SDC4P31431 198 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 PTGER4P35408 488 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 VAV2P52735 878 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 FOXL2P58012 376 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 PTP4A2Q12974 167 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 PAK1Q13153 545 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 ART3Q13508 389 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 GPR19Q15760 415 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 CA9Q16790 459 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 LRRC66Q68CR7 880 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 IRGCQ6NXR0 463 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 FAM198BQ6UWH4 519 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 Q6ZS92 163 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 SLC30A5Q8TAD4 765 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 GRHL3Q8TE85 626 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 SCRN2Q96FV2 425 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 PPM1MQ96MI6 270 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 MLPHQ9BV36 600 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 CINPQ9BW66 212 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 ILKAPQ9H0C8 392 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZNF552Q9H707 407 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 ARFGAP3Q9NP61 516 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 FGF21Q9NSA1 209 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 C5AR2Q9P296 337 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 RARRES3Q9UL19 164 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 FZD10Q9ULW2 581 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 PHTF1Q9UMS5 762 aa8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZNF469Q96JG9 3925 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P39-201ENST00000366304 OR52A4PA6NMU1 304 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 PSMD11O00231 422 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 CCP110O43303 1012 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 PGLSO95336 258 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 LCA5LO95447 670 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 LSM8O95777 96 aaKnown RBP8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZNF8P17098 575 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 AMD1P17707 334 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 CHRNB2P17787 502 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 MMP8P22894 467 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 HTR1EP28566 365 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 RORAP35398 523 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 STC1P52823 247 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 PER3P56645 1201 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 MAXP61244 160 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 AP1S1P61966 158 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 RELBQ01201 579 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 ABRQ12979 859 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 GPR18Q14330 331 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 CDSNQ15517 529 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 KYNUQ16719 465 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 EXOC3L4Q17RC7 722 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZNF630Q2M218 657 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 HGSNATQ68CP4 663 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 FBXO38Q6PIJ6 1188 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 WDR59Q6PJI9 974 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 GBP6Q6ZN66 633 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 MED25Q71SY5 747 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 PAF1Q8N7H5 531 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 TMEM102Q8N9M5 508 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 SMARCE1Q969G3 411 aa8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZNF501Q96CX3 271 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P39-201ENST00000366304 FCRL4Q96PJ5 515 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms