RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 CCDC190Q86UF4 302 aa3.83□□□□□ -1.8
RNU6-553P-201ENST00000364047 LONP2Q86WA8 852 aa3.83□□□□□ -1.8
RNU6-553P-201ENST00000364047 SLC5A8Q8N695 610 aa3.83□□□□□ -1.8
RNU6-553P-201ENST00000364047 PAF1Q8N7H5 531 aa3.83□□□□□ -1.8
RNU6-553P-201ENST00000364047 RDM1Q8NG50 284 aa3.83□□□□□ -1.8
RNU6-553P-201ENST00000364047 OR8K5Q8NH50 307 aa3.83□□□□□ -1.8
RNU6-553P-201ENST00000364047 RBM4Q9BWF3 364 aaKnown RBP3.83□□□□□ -1.8
RNU6-553P-201ENST00000364047 TMEM39BQ9GZU3 492 aa3.83□□□□□ -1.8
RNU6-553P-201ENST00000364047 EPB41L5Q9HCM4 733 aa3.83□□□□□ -1.8
RNU6-553P-201ENST00000364047 MTMR10Q9NXD2 777 aa3.83□□□□□ -1.8
RNU6-553P-201ENST00000364047 ZNF624Q9P2J8 865 aaPredicted RBP3.83□□□□□ -1.8
RNU6-553P-201ENST00000364047 JRKLQ9Y4A0 524 aa3.83□□□□□ -1.8
RNU6-553P-201ENST00000364047 A0A1W2PPI3 338 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 C5orf60A6NFR6 353 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 SMIM1B2RUZ4 78 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 PCDH7O60245 1069 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 EIF2S1P05198 315 aaKnown RBP3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 KRT19P08727 400 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 PSMA4P25789 261 aaKnown RBP3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 NFKBIAP25963 317 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 GALCP54803 685 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 MBTD1Q05BQ5 628 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 KIR2DS3Q14952 304 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 TMEM30BQ3MIR4 351 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 HSP90AB4PQ58FF6 505 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 NCEH1Q6PIU2 408 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 PLXDC2Q6UX71 529 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 GLDNQ6ZMI3 551 aaPredicted RBP3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 GBGT1Q8N5D6 347 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 SLC38A9Q8NBW4 561 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 ARHGEF2Q92974 986 aaKnown RBP3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 C1orf74Q96LT6 269 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 C7orf26Q96N11 449 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 BARHL1Q9BZE3 327 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 PIAS3Q9Y6X2 628 aa3.82□□□□□ -1.8
RNU6-553P-201ENST00000364047 PRAG1Q86YV5 1406 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 ARID4BQ4LE39 1312 aaPredicted RBP3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 A0A0G2JNG1 304 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 CCDC189A1A4V9 331 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 PLEKHD1A6NEE1 506 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 PLPP2O43688 288 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 CIDEAO60543 219 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 WISP2O76076 250 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 TBX18O95935 607 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 PATE4P0C8F1 98 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 HSD17B4P51659 736 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 CTSCP53634 463 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 CD81P60033 236 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 ERVK11-1P61568 191 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 KIR2DS5Q14953 304 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 ASPRV1Q53RT3 343 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 TECRLQ5HYJ1 363 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 ARHGAP17Q68EM7 881 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 PACS1Q6VY07 963 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 TMTC3Q6ZXV5 915 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 ANO5Q75V66 913 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 PDILTQ8N807 584 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 TDRD7Q8NHU6 1098 aaKnown RBP3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 TAS1R2Q8TE23 839 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 LGALS12Q96DT0 336 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 C17orf77Q96MU5 243 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 LITAFQ99732 161 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 FSD1Q9BTV5 496 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 UNC45AQ9H3U1 944 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 BICC1Q9H694 974 aaKnown RBP3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 DIAPH3Q9NSV4 1193 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 B3GALT5Q9Y2C3 310 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 TMEM184BQ9Y519 407 aaPredicted RBP3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 WDR81Q562E7 1941 aa3.81□□□□□ -1.8
RNU6-553P-201ENST00000364047 LIPT2A6NK58 231 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 SCAMP1O15126 338 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 ZBTB43O43298 467 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 BMP10O95393 424 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 NR3C1P04150 777 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 TFAP2AP05549 437 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 ANXA7P20073 488 aaKnown RBP3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 HRH2P25021 359 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 ALDH4A1P30038 563 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 MSH2P43246 934 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 PMP22Q01453 160 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 PPIGQ13427 754 aaKnown RBP eCLIP3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 ZSCAN23Q3MJ62 389 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 C14orf177Q52M58 125 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 ACSM2BQ68CK6 577 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 RBMS3Q6XE24 437 aaKnown RBP3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 TRPT1Q86TN4 253 aaKnown RBP3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 TSPAN33Q86UF1 283 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 HACE1Q8IYU2 909 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 GCSAMQ8N6F7 178 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 C1orf52Q8N6N3 182 aaKnown RBP3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 ZNF473Q8WTR7 871 aaKnown RBP3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 FCAMRQ8WWV6 532 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 SLC52A3Q9NQ40 469 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 MTMR6Q9Y217 621 aa3.8□□□□□ -1.8
RNU6-553P-201ENST00000364047 KIF26BQ2KJY2 2108 aa3.79□□□□□ -1.8
RNU6-553P-201ENST00000364047 C15orf62A8K5M9 175 aa3.79□□□□□ -1.8
RNU6-553P-201ENST00000364047 B4E171 279 aa3.79□□□□□ -1.8
RNU6-553P-201ENST00000364047 H0YIN7 160 aa3.79□□□□□ -1.8
RNU6-553P-201ENST00000364047 J3KRW8 73 aa3.79□□□□□ -1.8
RNU6-553P-201ENST00000364047 SMAD9O15198 467 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms