RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 IL1BP01584 269 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 CHRM5P08912 532 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-201ENST00000361866 GNAO1P09471 354 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 GRK3P35626 688 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 TAF10Q12962 218 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 KRR1Q13601 381 aaKnown RBP13.78□□□□□ -0.2
COL6A1-201ENST00000361866 DAG1Q14118 895 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 RAB39AQ14964 217 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 ARMC12Q5T9G4 340 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 PTCD2Q8WV60 388 aaKnown RBP13.78□□□□□ -0.2
COL6A1-201ENST00000361866 S100ZQ8WXG8 99 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 ADPRHL2Q9NX46 363 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 NAV1Q8NEY1 1877 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 SRCAPQ6ZRS2 3230 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 SLC7A4O43246 635 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 ANXA5P08758 320 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 RRM2P31350 389 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 C1QTNF8P60827 252 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 SEMG2Q02383 582 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 TRIM32Q13049 653 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 PDZK1Q5T2W1 519 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 FIBCD1Q8N539 461 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 PHF21AQ96BD5 680 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 ZNF696Q9H7X3 374 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 MARCH7Q9H992 704 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 PRKAG2Q9UGJ0 569 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 KLHL3Q9UH77 587 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 ZCWPW2A0A1B0GU75 182 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 STBD1O95210 358 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 TYMPP19971 482 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 CRYBB1P53674 252 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-201ENST00000361866 ZNF829Q3KNS6 432 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-201ENST00000361866 MON1AQ86VX9 555 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 LRRC49Q8IUZ0 686 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 KDM1BQ8NB78 822 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 PIK3C3Q8NEB9 887 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 FNDC8Q8TC99 324 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 CHCHD6Q9BRQ6 235 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 CD320Q9NPF0 282 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 ACTR3BQ9P1U1 418 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 AGO1Q9UL18 857 aaKnown RBP13.78□□□□□ -0.2
COL6A1-201ENST00000361866 PADI4Q9UM07 663 aa13.78□□□□□ -0.2
COL6A1-201ENST00000361866 IDH3BO43837 385 aa13.77□□□□□ -0.2
COL6A1-201ENST00000361866 PRKD3O94806 890 aa13.77□□□□□ -0.2
COL6A1-201ENST00000361866 MYCLP1P12525 358 aaPredicted RBP13.77□□□□□ -0.2
COL6A1-201ENST00000361866 SMPD1P17405 629 aa13.77□□□□□ -0.2
COL6A1-201ENST00000361866 GNPDA1P46926 289 aa13.77□□□□□ -0.2
COL6A1-201ENST00000361866 TIGD5Q53EQ6 642 aa13.77□□□□□ -0.2
COL6A1-201ENST00000361866 DDX53Q86TM3 631 aaKnown RBP13.77□□□□□ -0.2
COL6A1-201ENST00000361866 RTL3Q8N8U3 475 aaKnown RBP13.77□□□□□ -0.2
COL6A1-201ENST00000361866 GANCQ8TET4 914 aa13.77□□□□□ -0.2
COL6A1-201ENST00000361866 TEPSINQ96N21 525 aa13.77□□□□□ -0.2
COL6A1-201ENST00000361866 RBM4BQ9BQ04 359 aaKnown RBP13.77□□□□□ -0.2
COL6A1-201ENST00000361866 RBM4Q9BWF3 364 aaKnown RBP13.77□□□□□ -0.2
COL6A1-201ENST00000361866 FKBPLQ9UIM3 349 aa13.77□□□□□ -0.2
COL6A1-201ENST00000361866 TRPV2Q9Y5S1 764 aa13.77□□□□□ -0.2
COL6A1-201ENST00000361866 HNRNPCL2B2RXH8 293 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 UROSP10746 265 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 UMPSP11172 480 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 DGKAP23743 735 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 SLC5A2P31639 672 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 CASP9P55211 416 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 CREB5Q02930 508 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 TGFBIQ15582 683 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 INTS11Q5TA45 600 aaKnown RBP13.77□□□□□ -0.21
COL6A1-201ENST00000361866 GPR142Q7Z601 462 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 SLC15A3Q8IY34 581 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 FAM9CQ8IZT9 166 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 GRIN3AQ8TCU5 1115 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 NTAN1Q96AB6 310 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 BIRC7Q96CA5 298 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 SLC45A3Q96JT2 553 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 C12orf42Q96LP6 360 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 SMOQ99835 787 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 KIFC1Q9BW19 673 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 TEX12Q9BXU0 123 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 LRRC3Q9BY71 257 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 GMPR2Q9P2T1 348 aaKnown RBP13.77□□□□□ -0.21
COL6A1-201ENST00000361866 TCAF2A6NFQ2 919 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 RGS10O43665 173 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 GPC1P35052 558 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 ARHGAP1Q07960 439 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 ZNF789Q5FWF6 425 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 STEAP4Q687X5 459 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 TXNDC11Q6PKC3 985 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 SPNS2Q8IVW8 549 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 UBE2J2Q8N2K1 259 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 SYT17Q9BSW7 474 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 PSME2Q9UL46 239 aa13.77□□□□□ -0.21
COL6A1-201ENST00000361866 K7EPI3 171 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 PSMD11O00231 422 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 PRMT5O14744 637 aaPredicted RBP13.76□□□□□ -0.21
COL6A1-201ENST00000361866 CCNKO75909 580 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 POU2F1P14859 743 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 IST1P53990 364 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 GALNT2Q10471 571 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 TPGS1Q6ZTW0 290 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 R3HCC1LQ7Z5L2 792 aaKnown RBP13.76□□□□□ -0.21
COL6A1-201ENST00000361866 AKAP14Q86UN6 197 aa13.76□□□□□ -0.21
COL6A1-201ENST00000361866 LILRA2Q8N149 483 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms