RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CARNS1A5YM72 827 aa22.39■■□□□ 1.17
LDB1-201ENST00000361198 C8AP07357 584 aa22.39■■□□□ 1.17
LDB1-201ENST00000361198 CD9P21926 228 aa22.39■■□□□ 1.17
LDB1-201ENST00000361198 CD70P32970 193 aa22.39■■□□□ 1.17
LDB1-201ENST00000361198 SH3BGRP55822 239 aaPredicted RBP22.39■■□□□ 1.17
LDB1-201ENST00000361198 CLCQ05315 142 aa22.39■■□□□ 1.17
LDB1-201ENST00000361198 AGKQ53H12 422 aa22.39■■□□□ 1.17
LDB1-201ENST00000361198 LILRA6Q6PI73 481 aa22.39■■□□□ 1.17
LDB1-201ENST00000361198 CPXM2Q8N436 756 aa22.39■■□□□ 1.17
LDB1-201ENST00000361198 SMG9Q9H0W8 520 aaKnown RBP22.39■■□□□ 1.17
LDB1-201ENST00000361198 AKTIPQ9H8T0 292 aa22.39■■□□□ 1.17
LDB1-201ENST00000361198 SARS2Q9NP81 518 aaKnown RBP22.39■■□□□ 1.17
LDB1-201ENST00000361198 PCDHGB4Q9UN71 923 aa22.39■■□□□ 1.17
LDB1-201ENST00000361198 PCDHGB5Q9Y5G0 923 aa22.39■■□□□ 1.17
LDB1-201ENST00000361198 SLC30A1Q9Y6M5 507 aa22.39■■□□□ 1.17
LDB1-201ENST00000361198 SYCE1LA8MT33 242 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 H0YJX3 145 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 TNFAIP8O95379 198 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 PGM3O95394 542 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 TCN1P20061 433 aaPredicted RBP22.38■■□□□ 1.17
LDB1-201ENST00000361198 ADARP55265 1226 aaKnown RBP22.38■■□□□ 1.17
LDB1-201ENST00000361198 RHDQ02161 417 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 CREMQ03060 361 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 CACNG1Q06432 222 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 TRAP1Q12931 704 aaKnown RBP22.38■■□□□ 1.17
LDB1-201ENST00000361198 MPPE1Q53F39 396 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 CPNE9Q8IYJ1 553 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 PCDH20Q8N6Y1 951 aaKnown RBP22.38■■□□□ 1.17
LDB1-201ENST00000361198 TWIST2Q8WVJ9 160 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 DGCR14Q96DF8 476 aaKnown RBP22.38■■□□□ 1.17
LDB1-201ENST00000361198 CCDC97Q96F63 343 aaPredicted RBP22.38■■□□□ 1.17
LDB1-201ENST00000361198 LINGO1Q96FE5 620 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 P2RY12Q9H244 342 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 TNKS2Q9H2K2 1166 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 SEMA4BQ9NPR2 832 aaPredicted RBP22.38■■□□□ 1.17
LDB1-201ENST00000361198 INTS6Q9UL03 887 aaKnown RBP22.38■■□□□ 1.17
LDB1-201ENST00000361198 LZTS1Q9Y250 596 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 MYOFQ9NZM1 2061 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 E5RI56 91 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 PIP5K1BO14986 540 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 EFCAB14O75071 495 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 ZNF821O75541 412 aaPredicted RBP22.38■■□□□ 1.17
LDB1-201ENST00000361198 CLPTM1O96005 669 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 ESR1P03372 595 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 ALDOCP09972 364 aaKnown RBP22.38■■□□□ 1.17
LDB1-201ENST00000361198 LINC00271P0C7V0 271 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 ZNF26P17031 533 aaPredicted RBP22.38■■□□□ 1.17
LDB1-201ENST00000361198 ATXN3P54252 364 aaPredicted RBP22.38■■□□□ 1.17
LDB1-201ENST00000361198 IL2P60568 153 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 MYBPC1Q00872 1141 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 BCL2L1Q07817 233 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 IL23RQ5VWK5 629 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 KANK2Q63ZY3 851 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 REP15Q6BDI9 236 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 C8orf82Q6P1X6 216 aaPredicted RBP22.38■■□□□ 1.17
LDB1-201ENST00000361198 PAOXQ6QHF9 649 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 OR9I1Q8NGQ6 314 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 DUS3LQ96G46 650 aaKnown RBP22.38■■□□□ 1.17
LDB1-201ENST00000361198 CD300AQ9UGN4 299 aa22.38■■□□□ 1.17
LDB1-201ENST00000361198 SNRPB2P08579 225 aaKnown RBP22.37■■□□□ 1.17
LDB1-201ENST00000361198 AGTR2P50052 363 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 HK3P52790 923 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 CDKL1Q00532 357 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 LCP2Q13094 533 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 PLEKHG6Q3KR16 790 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 MPP7Q5T2T1 576 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 ANKS6Q68DC2 871 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 FAM151BQ6UXP7 276 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 HACD2Q6Y1H2 254 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 FIBCD1Q8N539 461 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 RPL10LQ96L21 214 aaKnown RBP22.37■■□□□ 1.17
LDB1-201ENST00000361198 SLC46A2Q9BY10 475 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 SLC2A11Q9BYW1 496 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 TUBB1Q9H4B7 451 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 KIAA1522Q9P206 1035 aaPredicted RBP22.37■■□□□ 1.17
LDB1-201ENST00000361198 GIMAP2Q9UG22 337 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 ZNF510Q9Y2H8 683 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 TRAV19A0A0A6YYK7 116 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 A0A0J9YYE9 177 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 LEFTY2O00292 366 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 GAPDHSO14556 408 aaPredicted RBP22.37■■□□□ 1.17
LDB1-201ENST00000361198 HTRA2O43464 458 aaPredicted RBP22.37■■□□□ 1.17
LDB1-201ENST00000361198 CSPG5O95196 566 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 CXCL14O95715 111 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 TRBC1P01850 177 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 RPS17P08708 135 aaKnown RBP22.37■■□□□ 1.17
LDB1-201ENST00000361198 CA5AP35218 305 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 FIBINQ8TAL6 211 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 ATP6V1E2Q96A05 226 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 CORO1BQ9BR76 489 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 SLC25A23Q9BV35 468 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 MRPS26Q9BYN8 205 aaKnown RBP22.37■■□□□ 1.17
LDB1-201ENST00000361198 ZFYVE1Q9HBF4 777 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 SPAG4Q9NPE6 437 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 AP4S1Q9Y587 144 aa22.37■■□□□ 1.17
LDB1-201ENST00000361198 C1orf232A0A0U1RR37 186 aa22.36■■□□□ 1.17
LDB1-201ENST00000361198 KLK8O60259 260 aa22.36■■□□□ 1.17
LDB1-201ENST00000361198 OR6B1O95007 311 aa22.36■■□□□ 1.17
LDB1-201ENST00000361198 ACADVLP49748 655 aa22.36■■□□□ 1.17
LDB1-201ENST00000361198 ATP4BP51164 291 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms