RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 TSPAN1O60635 241 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 ECDO95905 644 aaPredicted RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 BMP7P18075 431 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 CYP3A5P20815 502 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 ICAM3P32942 547 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 RAB15P59190 212 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 KLF10Q13118 480 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 IL18Q14116 193 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 POMZP3Q6PJE2 187 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 DCBLD1Q8N8Z6 715 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 GALNT6Q8NCL4 622 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 DQX1Q8TE96 717 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 RASSF5Q8WWW0 418 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 PHF12Q96QT6 1004 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 AGO3Q9H9G7 860 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 IQCF5A8MTL0 148 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 MDM4O15151 490 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 TOP3BO95985 862 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 ZBTB48P10074 688 aaPredicted RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 CORO1AP31146 461 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 ADRA1BP35368 520 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 POLR2JP52435 117 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 MPP1Q00013 466 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 SIM2Q14190 667 aaPredicted RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 SMU1Q2TAY7 513 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 TNFAIP8L3Q5GJ75 292 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 INTS6LQ5JSJ4 861 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 IRGQQ8WZA9 623 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 TSSK3Q96PN8 268 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 RACGAP1Q9H0H5 632 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 OSER1Q9NX31 292 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 CCNDBP1O95273 360 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 ARL2P36404 184 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 MANFP55145 182 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 CBX2Q14781 532 aaPredicted RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 ALKBH2Q6NS38 261 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 TRPV1Q8NER1 839 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 OR2T12Q8NG77 320 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 CSPG4P5Q96PW8 444 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 CPXM1Q96SM3 734 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 TPK1Q9H3S4 243 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 TBC1D14Q9P2M4 693 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 CCL16O15467 120 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 KRT33AO76009 404 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 APODP05090 189 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 PEX2P28328 305 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 HNMTP50135 292 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 RABGGTBP53611 331 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 ZNF354BQ96LW1 612 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 MED28Q9H204 178 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 ZNF780BQ9Y6R6 833 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 CCL22O00626 93 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 RPP40O75818 363 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 LRIG2O94898 1065 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 CD48P09326 243 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 MMP8P22894 467 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 CTSKP43235 329 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 GSCP56915 257 aaPredicted RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 SMIM11AP58511 58 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 ENPEPQ07075 957 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 RNASEH2BQ5TBB1 312 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 ANXA8L1Q5VT79 327 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 CLIP4Q8N3C7 705 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 OR52J3Q8NH60 311 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 CCDC115Q96NT0 180 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 TLE6Q9H808 572 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 CHRAC1Q9NRG0 131 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 INTS7Q9NVH2 962 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 NKIRAS2Q9NYR9 191 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 CD84Q9UIB8 345 aa12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 MAFBQ9Y5Q3 323 aaPredicted RBP12.12□□□□□ -0.47
CCDC144A-204ENST00000360524 ZNF879B4DU55 563 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 AP2A2O94973 939 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 TRBC1P01850 177 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 LSM12Q3MHD2 195 aaKnown RBP12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 ANKRD22Q5VYY1 191 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 GLYATQ6IB77 296 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 RASGEF1CQ8N431 466 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 TWIST2Q8WVJ9 160 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 SLC44A1Q8WWI5 657 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 MAGEL2Q9UJ55 1249 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 RAB23Q9ULC3 237 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 RPTORQ8N122 1335 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 MRC1P22897 1456 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 CAMTA1Q9Y6Y1 1673 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 TBC1D3DA0A087WVF3 549 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 TBC1D3IA0A087WXS9 549 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 TBC1D3EA0A087X179 549 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 TBC1D3KA0A087X1G2 549 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 TBC1D3FA6NER0 549 aaPredicted RBP12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 TBC1D3LB9A6J9 549 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 E9PAM4 449 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 CDC40O60508 579 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 SCN2BO60939 215 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 DUSP11O75319 330 aaKnown RBP12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 UGT2B17O75795 530 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 TBC1D3HP0C7X1 549 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 THRBP10828 461 aa12.11□□□□□ -0.47
CCDC144A-204ENST00000360524 NCK1P16333 377 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms