RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 RAP2CQ9Y3L5 183 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 GMEB1Q9Y692 573 aa13.76□□□□□ -0.21
CSNK1E-201ENST00000359867 ZNF195O14628 629 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 BUD23O43709 281 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 FZD6O60353 706 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 FDXRP22570 491 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 ATP5F1P24539 256 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 MAPK8P45983 427 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 PLK1P53350 603 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 PGGT1BP53609 377 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 CSHL1Q14406 222 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 PTPRCAPQ14761 206 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 SFT2D3Q587I9 215 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 TECRLQ5HYJ1 363 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 OR4K2Q8NGD2 314 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 STON2Q8WXE9 905 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 SLC2A11Q9BYW1 496 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 FBRSL1Q9HCM7 1045 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 ZDHHC4Q9NPG8 344 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 VPS9D1Q9Y2B5 631 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 PRRT4C9JH25 899 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 NPHS1O60500 1241 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 CCDC166P0CW27 439 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 PMLP29590 882 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 IDH3AP50213 366 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 SUOXP51687 545 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 PFKPQ01813 784 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 TUBB3Q13509 450 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 TCHHL1Q5QJ38 904 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 LDB1Q86U70 411 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 ZBTB8BQ8NAP8 495 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 CSGALNACT1Q8TDX6 532 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 SNRNP27Q8WVK2 155 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 TM6SF2Q9BZW4 377 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 VCX3BQ9H321 246 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 VCX3AQ9NNX9 186 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 HEBP1Q9NRV9 189 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 SLCO3A1Q9UIG8 710 aa13.75□□□□□ -0.21
CSNK1E-201ENST00000359867 KIAA1549LQ6ZVL6 1849 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 SLCO1B7G3V0H7 640 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 PFDN6O15212 129 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 NAGLUP54802 743 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 CDKN2DP55273 166 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 RPL26P61254 145 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 PRKAA1Q13131 559 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 LSAMPQ13449 338 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 GRAMD4Q6IC98 578 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 TXNDC11Q6PKC3 985 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 MAVSQ7Z434 540 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 AHI1Q8N157 1196 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 ZNF781Q8N8C0 355 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 SMYD1Q8NB12 490 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 NCSTNQ92542 709 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 C19orf43Q9BQ61 176 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 SPATA16Q9BXB7 569 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 PDP2Q9P2J9 529 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 ADAMTS6Q9UKP5 1117 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 ATG2BQ96BY7 2078 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 H7C0S8 307 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 NAT1P18440 290 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 NCF2P19878 526 aaPredicted RBP13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 PEX2P28328 305 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 SEMA3AQ14563 771 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 ZNF549Q6P9A3 640 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 EPGNQ6UW88 154 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 PIWIL4Q7Z3Z4 852 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 KIAA0907Q7Z7F0 614 aaPredicted RBP13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 PHTF2Q8N3S3 785 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 TTC30BQ8N4P2 665 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 ZNF557Q8N988 423 aaPredicted RBP13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 AGR3Q8TD06 166 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 AARSD1Q9BTE6 412 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 MAGEE1Q9HCI5 957 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 S100A14Q9HCY8 104 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 ACSS2Q9NR19 701 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 NCKIPSDQ9NZQ3 722 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 CRYL1Q9Y2S2 319 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 TMEM98Q9Y2Y6 226 aa13.74□□□□□ -0.21
CSNK1E-201ENST00000359867 TXNDC9O14530 226 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 BNIP3LO60238 219 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 POLR2EP19388 210 aaKnown RBP13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 RPL14P50914 215 aaKnown RBP13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 AQP4P55087 323 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 ATXN7L2Q5T6C5 722 aaPredicted RBP13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 ARMC12Q5T9G4 340 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 METTL21CQ5VZV1 264 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 SPATA6LQ8N4H0 392 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 ZNF366Q8N895 744 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 TERB1Q8NA31 727 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 OR6K2Q8NGY2 324 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 ABTB1Q969K4 478 aaPredicted RBP13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 CNDP1Q96KN2 507 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 TNKS2Q9H2K2 1166 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 INIPQ9NRY2 104 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 VTI1BQ9UEU0 232 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 SLC27A6Q9Y2P4 619 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 STX7O15400 261 aaKnown RBP13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 SRCP12931 536 aa13.73□□□□□ -0.21
CSNK1E-201ENST00000359867 CD1EP15812 388 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms