RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ADAMDEC1O15204 470 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 ARP10275 920 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 NPR2P20594 1047 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 GSK3BP49841 420 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 FOXM1Q08050 763 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 TWF1Q12792 350 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 TXNDC11Q6PKC3 985 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 FAM183BPQ6ZVS7 135 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 DBNDD1Q9H9R9 158 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 UBQLN2Q9UHD9 624 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 FBXO5Q9UKT4 447 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 USP32Q8NFA0 1604 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 TADA2AO75478 443 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 RAP2AP10114 183 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 LCN1P31025 176 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 KRT33BQ14525 404 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF655Q8N720 491 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 HAS1Q92839 578 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 AGAP2Q99490 1192 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 TREM1Q9NP99 234 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 SCUBE2Q9NQ36 999 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 M0R233 179 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 TNNI3P19429 210 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 C10orf120Q5SQS8 335 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 RAB12Q6IQ22 244 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 KLHL24Q6TFL4 600 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 FAM220AQ7Z4H9 259 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 KRT77Q7Z794 578 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 KREMEN1Q96MU8 473 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 C1QTNF1Q9BXJ1 281 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 C2orf74A8MZ97 194 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 TMEM63AO94886 807 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 CD2P06729 351 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 COL6A2P12110 1019 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 CD72P21854 359 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 EIF2S3P41091 472 aaKnown RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 GPX6P59796 221 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 TAGLNQ01995 201 aaKnown RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 MAPKAPK3Q16644 382 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 SYT16Q17RD7 645 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 GPR153Q6NV75 609 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 SYT12Q8IV01 421 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 PSTKQ8IV42 348 aaKnown RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 MFSD2AQ8NA29 543 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 OR13J1Q8NGT2 312 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 TNFAIP8L1Q8WVP5 186 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 UFD1Q92890 307 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 PRR12Q9ULL5 1215 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 LRRC14BA6NHZ5 514 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 FGFR1P11362 822 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 CHRNB2P17787 502 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 GPR15P49685 360 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 HECTD3Q5T447 861 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 USP30Q70CQ3 517 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 OR6Q1Q8NGQ2 317 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 PPA2Q9H2U2 334 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 PRMT7Q9NVM4 692 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-203ENST00000358544 GLS2Q9UI32 602 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 LMTK3Q96Q04 1460 aa6.03□□□□□ -1.44
VPS13B-203ENST00000358544 FAM234BA2RU67 622 aa6.02□□□□□ -1.44
VPS13B-203ENST00000358544 ECDO95905 644 aaPredicted RBP6.02□□□□□ -1.44
VPS13B-203ENST00000358544 PTPN1P18031 435 aaKnown RBP6.02□□□□□ -1.44
VPS13B-203ENST00000358544 PAICSP22234 425 aaKnown RBP6.02□□□□□ -1.44
VPS13B-203ENST00000358544 NKX2-3Q8TAU0 364 aa6.02□□□□□ -1.44
VPS13B-203ENST00000358544 MAELQ96JY0 434 aaKnown RBP6.02□□□□□ -1.44
VPS13B-203ENST00000358544 BCL7BQ9BQE9 202 aa6.02□□□□□ -1.44
VPS13B-203ENST00000358544 IDI2Q9BXS1 227 aa6.02□□□□□ -1.44
VPS13B-203ENST00000358544 KCNN2Q9H2S1 579 aa6.02□□□□□ -1.44
VPS13B-203ENST00000358544 KLHL28Q9NXS3 571 aa6.02□□□□□ -1.44
VPS13B-203ENST00000358544 MYO5BQ9ULV0 1848 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 MTORP42345 2549 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 FAM86B1E9PN63 330 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 RP2O75695 350 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 TSPAN8P19075 237 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 UQCRC1P31930 480 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CDH12P55289 794 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 MXD1Q05195 221 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF613Q6PF04 617 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ARSKQ6UWY0 536 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ANKS1BQ7Z6G8 1248 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CPNE8Q86YQ8 564 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF34Q8IZ26 560 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 TWIST2Q8WVJ9 160 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 TCEAL4Q96EI5 215 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 DPCDQ9BVM2 203 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 NECTIN3Q9NQS3 549 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 STARD7Q9NQZ5 370 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 MIA3Q5JRA6 1907 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 AGLP35573 1532 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 NPEPPSL1A6NEC2 478 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 A8MU76 341 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CDKL1Q00532 357 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CEACAM7Q14002 265 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 KCNJ8Q15842 424 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 MEP1AQ16819 746 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CDKL4Q5MAI5 379 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ILDR2Q71H61 639 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 RELL1Q8IUW5 271 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CHPT1Q8WUD6 406 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CDK5RAP1Q96SZ6 601 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms