RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 HSPA4LO95757 839 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 ZSCAN5DPP0CG00 497 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 SHMT2P34897 504 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 PNLIPRP1P54315 467 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 CRYMQ14894 314 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 PHF19Q5T6S3 580 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 KIAA0907Q7Z7F0 614 aaPredicted RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 LRRC8CQ8TDW0 803 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 QRFPRQ96P65 431 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 HAUS8Q9BT25 410 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 PRSS38A1L453 326 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 FAM221BA6H8Z2 402 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 ATP8B1O43520 1251 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 GUCY1B2O75343 617 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 ENO2P09104 434 aaPredicted RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 JMJD7P0C870 316 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 CDH3P22223 829 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 MLLT3P42568 568 aaPredicted RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 PGFP49763 221 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 HSPA14Q0VDF9 509 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 CCDC153Q494R4 210 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 CAPN13Q6MZZ7 669 aaPredicted RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 LIPIQ6XZB0 460 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 LRRC69Q6ZNQ3 347 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 BNIPLQ7Z465 357 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 PLXDC1Q8IUK5 500 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 MYRIPQ8NFW9 859 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 LRRN4Q8WUT4 740 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 RUVBL2Q9Y230 463 aaKnown RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 ATXN2Q99700 1313 aaKnown RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 PLK4O00444 970 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 ARHGAP33O14559 1287 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 HBQ1P09105 142 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 LTA4HP09960 611 aaKnown RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 AGXTP21549 392 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 HOXA6P31267 233 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 MMP12P39900 470 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 TMEM115Q12893 351 aaPredicted RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 ABRQ12979 859 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 IFT88Q13099 833 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 TCEA2Q15560 299 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 IRGCQ6NXR0 463 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 MAMSTRQ6ZN01 415 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 LCA5Q86VQ0 697 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 ARFGAP1Q8N6T3 406 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 KIAA1143Q96AT1 154 aaPredicted RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 PRMT8Q9NR22 394 aaPredicted RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 FBXO6Q9NRD1 293 aaPredicted RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 KIAA0100Q14667 2235 aaKnown RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 TRAFD1O14545 582 aaPredicted RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 BUD23O43709 281 aaKnown RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 FKBP9O95302 570 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 HOXC4P09017 264 aaPredicted RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 HRH2P25021 359 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 HMGCLP35914 325 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 CDK3Q00526 305 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 TAZQ16635 292 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 FAM9CQ8IZT9 166 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 NXPE1Q8N323 547 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 STAG3L4Q8TBR4 150 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 DLG3Q92796 817 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 C19orf43Q9BQ61 176 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 C6orf106Q9H6K1 298 aaPredicted RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 TRIM45Q9H8W5 580 aaPredicted RBP9.09□□□□□ -0.95
UPF2-202ENST00000357604 PDFQ9HBH1 243 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 ARL15Q9NXU5 204 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 KIAA1671Q9BY89 1806 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 OR2AG2A6NM03 316 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 GMNNO75496 209 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 BMP10O95393 424 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 MPC1LP0DKB6 136 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 JUPP14923 745 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 KIR2DL1P43626 348 aaPredicted RBP9.08□□□□□ -0.96
UPF2-202ENST00000357604 SLC30A9Q6PML9 568 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 SLC6A18Q96N87 628 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 ACOX2Q99424 681 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 TBK1Q9UHD2 729 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 SALL4Q9UJQ4 1053 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 TMEM98Q9Y2Y6 226 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 R4GN57 208 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 C2orf74A8MZ97 194 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 H3BQF6 201 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 SLC16A5O15375 505 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 CD63P08962 238 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 MYBL2P10244 700 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 DMWDQ09019 674 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 WASHC5Q12768 1159 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 INPP5AQ14642 412 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 KCNJ11Q14654 390 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 OASLQ15646 514 aaKnown RBP9.08□□□□□ -0.96
UPF2-202ENST00000357604 RNASEH2BQ5TBB1 312 aaKnown RBP9.08□□□□□ -0.96
UPF2-202ENST00000357604 FOXR1Q6PIV2 292 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 LVRNQ6Q4G3 990 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 TSSK4Q6SA08 328 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 UBE2R2Q712K3 238 aaPredicted RBP9.08□□□□□ -0.96
UPF2-202ENST00000357604 NLRP8Q86W28 1048 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 GPSM1Q86YR5 675 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 ANKRD42Q8N9B4 389 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 CPT1BQ92523 772 aa9.08□□□□□ -0.96
UPF2-202ENST00000357604 RAD51AP1Q96B01 352 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms